MétaCan
Menu
Back to cohort
Record W2795981252 · doi:10.1021/acs.est.8b00512

Organohalogens Naturally Biosynthesized in Marine Environments and Produced as Disinfection Byproducts Alter Sarco/Endoplasmic Reticulum Ca<sup>2+</sup>Dynamics

2018· article· en· W2795981252 on OpenAlexfundno aff
Jing Zheng, Shaun M. K. McKinnie, Abrahim El Gamal, Wei Feng, Yao Dong, Vinayak Agarwal, William Fenical, Abdhesh Kumar, Zhengyu Cao, Bradley S. Moore, Isaac N. Pessah

Bibliographic record

VenueEnvironmental Science & Technology · 2018
Typearticle
Languageen
FieldEnvironmental Science
TopicWater Treatment and Disinfection
Canadian institutionsnot available
FundersDivision of Ocean SciencesNatural Sciences and Engineering Research Council of CanadaNational Institute of Environmental Health SciencesChina Scholarship CouncilNational Science FoundationNational Institutes of HealthU.S. Environmental Protection Agency
KeywordsEndoplasmic reticulumChemistryCell biologyBiochemistryBiology

Abstract

fetched live from OpenAlex

Contemporary sources of organohalogens produced as disinfection byproducts (DBPs) are receiving considerable attention as emerging pollutants because of their abundance, persistence, and potential to structurally mimic natural organohalogens produced by bacteria that serve signaling or toxicological functions in marine environments. Here, we tested 34 organohalogens from anthropogenic and marine sources to identify compounds active toward ryanodine receptor (RyR1), known toxicological targets of non-dioxin-like polychlorinated biphenyls (PCBs) and polybrominated diphenyl ethers (PBDEs). [ 3 H]Ryanodine ([ 3 H]Ry) binding screening (≤2 μM) identified 10 highly active organohalogens. Further analysis indicated that 2,3-dibromoindole ( 14 ), tetrabromopyrrole ( 31 ), and 2,3,5-tribromopyrrole ( 34 ) at 10 μM were the most efficacious at enhancing [ 3 H]Ry binding. Interestingly, these congeners also inhibited microsomal sarcoplasmic/endoplasmic reticulum (SR/ER) Ca 2+ ATPase (SERCA1a). Dual SERCA1a inhibition and RyR1 activation triggered Ca 2+ efflux from microsomal vesicles with initial rates rank ordered 31 > 34 > 14 . Hexabromobipyrroles ( 25 ) enhanced [ 3 H]Ry binding moderately with strong SERCA1a inhibition, whereas pyrrole ( 24 ), 2,3,4-tribromopyrrole ( 26 ), and ethyl-4-bromopyrrole-2-carboxylate ( 27 ) were inactive. Of three PBDE derivatives of marine origin active in the [ 3 H]Ry assay, 4′-hydroxy-2,3′,4,5′,6-pentabromodiphenyl ether ( 18 ) was also a highly potent SERCA1a inhibitor. Molecular targets of marine organohalogens that are also DBPs of emerging environmental concern are likely to contribute to their toxicity.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.002
GPT teacher head0.188
Teacher spread0.185 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations18
Published2018
Admission routes1
Has abstractyes

Explore more

Same venueEnvironmental Science & TechnologySame topicWater Treatment and DisinfectionFrench-language works237,207