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Cataloguing and monitoring changes in Arctic marine biodiversity through SCUBA diving

2018· preprint· en· W2796553730 on OpenAlexaffabout
Donna M Gibbs, C.J. Gibbs, Jessica Schultz

Bibliographic record

Venuenot available
Typepreprint
Languageen
FieldEnvironmental Science
TopicMarine and fisheries research
Canadian institutionsCoquitlam College
Fundersnot available
KeywordsBayScuba divingBiodiversityArcticAbundance (ecology)GeographyFisheryBenchmarkingOceanographyMarine biodiversityShoreWetlandEcologyEnvironmental scienceBiologyArchaeology

Abstract

fetched live from OpenAlex

Since 2014 divers from Ocean Wise have been SCUBA diving in the Cambridge Bay, Nunavut area collecting data on fishes, invertebrates and marine plants at numerous sites. For each dive a file is created that catalogues the species found and a rough abundance of that species. These files accumulate over time and are searchable by location, year, year and month, month, species and a number of other criteria with custom software created for this purpose. Relationships between species is automatic with the searches. In addition to the species catalogue that began in 2014, data has been scrounged from previous collecting trips by staff and personal dive logs before 2014, allowing for comparison between Pond Inlet, Resolute and Cambridge Bay. We were able to flag a potential decline in one species in 2017 thanks to our previous data. Our goal is to work to cooperatively with others diving in the Arctic to grow this database through photography and dive records. At this point we have 149 dives/records and 279 species recorded. The database is used to support the Nearshore Ecological Surveys and the Arctic Marine Ecological Benchmarking Program reports. In addition to biodiversity data, temperature, salinity, pH and dissolved oxygen are also collected while in the area.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.003
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.083
Threshold uncertainty score0.164

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.003
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0090.008
Science and technology studies0.0010.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.039
GPT teacher head0.264
Teacher spread0.225 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2018
Admission routes2
Has abstractyes

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