MétaCan
Menu
Back to cohort
Record W2799274489 · doi:10.1139/cjb-2017-0223

Involvement of type-<i>f</i> thioredoxins during germination and early seedling development and in response to oxidative stress in <i>Arabidopsis thaliana</i>

2018· article· en· W2799274489 on OpenAlexafffundvenue
Abdelmadjid Djoumad, Solange Villette, Iauhenia Isayenka, Nathalie Beaudoin

Bibliographic record

VenueBotany · 2018
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicRedox biology and oxidative stress
Canadian institutionsUniversité de Sherbrooke
FundersNational Science CouncilUniversité de Sherbrooke
KeywordsSeedlingBiologyGerminationAbiotic stressArabidopsis thalianaAbscisic acidArabidopsisBotanyOxidative stressAbiotic componentReactive oxygen speciesMutantCell biologyBiochemistryGene

Abstract

fetched live from OpenAlex

Thioredoxins (TRXs) are important components of redox-regulated systems involved in maintaining and regulating the cellular redox environment during growth and development and in response to abiotic and biotic stresses. Plants possess several types of TRX localized in various compartments, including five different types of chloroplastic TRXs. Arabidopsis thaliana contains two chloroplastic type-f TRXs, TRX f1 and TRX f2, involved in the regulation of light-dependent activation of photosynthesis and carbon metabolism. However, little is known about their role during development and in response to stress. We used single and double mutants of TRX f1 and TRX f2 to assess their roles during seed germination and seedling development. Loss of both TRX f1 and TRX f2 induced faster germination and seedling development associated with reduced sensitivity to abscisic acid. This suggests that type-f TRXs negatively regulate seed germination and seedling development. Moreover, double-mutant seedlings were more sensitive to methyl viologen and UV-C irradiation than the wild-type seedlings, indicating that loss of type-f TRXs increases sensitivity to oxidative stress. Overall, these results indicate that type-f TRXs contribute to maintaining an adequate cellular environment required for a tight regulation of germination and a better tolerance to oxidative stress.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.256
Teacher spread0.244 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2018
Admission routes3
Has abstractyes

Explore more

Same venueBotanySame topicRedox biology and oxidative stressFrench-language works237,207