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Record W2802243203

Novel pathogenic mechanisms of porcine reproductive and respiratory syndrome virus: intercellular transmission and persistence

2018· dissertation· en· W2802243203 on OpenAlexfundno aff
Rui Guo

Bibliographic record

VenueK-State Research Exchange (Kansas State University) · 2018
Typedissertation
Languageen
FieldArts and Humanities
TopicHermeneutics and Narrative Identity
Canadian institutionsnot available
FundersMcGill University
KeywordsPorcine reproductive and respiratory syndrome virusPersistence (discontinuity)Respiratory systemVirologyTransmission (telecommunications)BiologyVirusIntracellularImmunologyMedicineCell biologyAnatomyComputer scienceEngineeringTelecommunications
DOInot available

Abstract

fetched live from OpenAlex

Porcine reproductive and respiratory syndrome virus (PRRSV) causes a tremendous economic loss in swine industry worldwide.The capabilities to evade host immune responses and to establish persistent infection are the two hallmark features of PRRSV infection.In this dissertation, the research was mainly focused on investigating the novel mechanisms underlying PRRSV transmission and persistence.In chapter 2, the research was focused on an alternative pathway of PRRSV intercellular transmission.Our data showed that intercellular nanotube connections can be utilized for cell-tocell spreading the core infectious viral machinery (viral RNA, certain replicases and structural proteins) of PRRSV.Live-cell movies tracked the intercellular transport of a recombinant PRRSV that expressed green fluorescent protein (GFP)-tagged nsp2 in a receptor-independent manner.The cytoskeleton proteins F-actin and myosin-IIA were identified as co-precipitates with PRRSV nanotube associated proteins.Drugs inhibiting actin polymerization or myosin-IIA activation prevented nanotube formations and viral clusters in virus-infected cells.These data lead us to propose that PRRSV utilizes the host cell cytoskeletal machinery inside nanotubes for efficient cell-to-cell spread.This form of virus transport represents an alternative pathway for virus spread, which is resistant to the host humoral immune response.In chapter 3, we further showed that PRRSV infection could induce the formation of nanotubes between infected and uninfected cells following a ROS-dependent nanotube formation model.Co-culturing PRRSV-infected cells with uninfected cells rescued PRRSV-induced cell death.Mitochondrion was observed transferring from uninfected to PRRSV-infected cells.Importantly, impaired formation of nanotube or defective mitochondrion was unable to rescue infected cells from apoptosis/necrosis.Certain PRRSV proteins were detected to associate with mitochondria and transport from infected to uninfected cells through TNTs.Our results suggest that TNTs-transfer of functional mitochondria rescued PRRSV-infected cells from apoptosis/necrosis in the early stage of infection.On the other hand, mitochondria could be utilized as a cargo to transport viral materials for spreading the infection.In chapter 4, a novel mechanism s of PRRSV persistent infection has been studied.In this study, a cellular model of persistent infection was established.Strand-specific quantitative RT-PCR and RNase I treatment analysis showed that double-stranded RNA (dsRNA) conformation existed in persistently infected cells.This data has been further confirmed in vivo by performing two independent PRRSV persistence studies.Immunohistochemistry analysis showed that viral dsRNAs were detected aggregating inside the germinal centers of tonsils and lymph nodes from PRRSV persistence pigs, but RNA array analysis further showed that dsRNA in lymphoid tissues had limited ability to stimulate host antiviral responses during persistent infection stage.These results suggest that the PRRSV dsRNA functions as a mediator for viral persistence.The viral dsRNA persistence in germinal centers of lymphoid tissues may reveal a novel mechanism for PRRSV to escape antiviral immune responses.In summary, this study investigated two novel pathogenic mechanisms of PRRSV infection, which could provide insights on the development of effective control strategies.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.658
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.000
Science and technology studies0.0010.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.086
GPT teacher head0.277
Teacher spread0.191 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designNot applicable
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2018
Admission routes1
Has abstractyes

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