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Record W2803116486

Abstract 19233: C-myb Regulates Microrna143 and Microrna145 Gene Expression in Embryonic and Adult Vascular Smooth Muscle Cells

2016· article· en· W2803116486 on OpenAlexaff
Mark Chandy, Masayoshi Ishida, Eric A. Shikatani, Omar El-Mouranyi, Talat Alfrooze, Mansoor Husain

Bibliographic record

VenueCirculation · 2016
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCancer-related molecular mechanisms research
Canadian institutionsToronto General Hospital
Fundersnot available
KeywordsVascular smooth muscleBiologyMYBTranscription factorCell biologyProgenitor cellEmbryonic stem cellMolecular biologyReporter genemicroRNAGene expressionStem cellGeneGeneticsEndocrinology
DOInot available

Abstract

fetched live from OpenAlex

Background: MicroRNAs (miR) are small non-coding RNAs. The bicistronic miR-143/145 gene determines cell fate of cardiomyocytes, vascular smooth muscle cells (VSMC) and endothelial cells. The regulation of miR-143/145 remains unclear. Transcription factor c-Myb controls proliferation and differentiation of hematopoiesis progenitors and VSMC. Hypothesis: c-Myb regulates miR-143/145 expression in VSMC proliferation and differentiation. Methods & Results: Flow cytometry of d3.75 mouse embryoid bodies (EBs) was used to isolate SMC progenitors with surface markers VEGFR2 (V) and PDGFRα (P). In c-myb knockout EB, V + /P - and V-/P+ progenitor cells had low expression of miR-143/145 suggesting a role for c-Myb in their regulation. Primary carotid VSMC isolated from mice with diminished expression of c-Myb (LoxP) treated with TGFβ have reduced expression of miR-143 and miR-145. Sequence alignment identified c-Myb-binding sites (MBS) in the promoter of the miR-143/145 gene. ChIP assays in EBs and adult VSMC revealed c-Myb binding to MBS. Using site-directed mutagenesis in a promoter-reporter construct, we identified MBS mediate transcriptional regulation of miR-143/145 in VSMC. Immunoblots were used to test whether c-Myb regulated a known target of miR-143, the ETS domain-containing protein-1 (Elk-1). Increased levels of c-Myb inversely correlated with Elk-1, suggesting c-Myb represses Elk-1. This effect was abrogated by miR-143 antagomir, and enhanced by miR-143 mimic. Conclusion: c-Myb regulates miR-143/145 expression in differentiating embryonic SMC progenitors and TGFβ-stimulated adult VSMC via MBS in the miR-143/145 promoter.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.007
Threshold uncertainty score0.022

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0070.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.226
Teacher spread0.219 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes1
Has abstractyes

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