MétaCan
Menu
Back to cohort
Record W2883776468 · doi:10.1094/pdis-04-18-0582-pdn

First Report of <i>Diplodia corticola</i> Causing Stem and Branch Cankers on White Oak (<i>Quercus alba</i>) in Missouri, U.S.A.

2018· article· en· W2883776468 on OpenAlexaffabout
Sharon E. Reed, James T. English, Sara R. Lalk, K. M. Tosie

Bibliographic record

VenuePlant Disease · 2018
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Pathogens and Fungal Diseases
Canadian institutionsOntario Forest Research Institute
FundersMissouri Department of ConservationU.S. Forest Service
KeywordsBiologyWhite (mutation)BotanyHorticultureGenetics

Abstract

fetched live from OpenAlex

HomePlant DiseaseVol. 102, No. 12First Report of Diplodia corticola Causing Stem and Branch Cankers on White Oak (Quercus alba) in Missouri, U.S.A. PreviousNext DISEASE NOTES OPENOpen Access licenseFirst Report of Diplodia corticola Causing Stem and Branch Cankers on White Oak (Quercus alba) in Missouri, U.S.A.S. E. Reed, J. T. English, S. R. Lalk, and K. M. TosieS. E. Reed†Corresponding author: S. E. Reed; E-mail: E-mail Address: [email protected]http://orcid.org/0000-0002-7724-333X, J. T. English, S. R. Lalk, and K. M. TosieAffiliationsAuthors and Affiliations S. E. Reed † , Ontario Forest Research Institute, Sault Ste. Marie, ON P6A 2E5, Canada J. T. English , Plant Sciences Division, University of Missouri, Columbia, 65211 S. R. Lalk K. M. Tosie , School of Natural Resources, University of Missouri, Columbia, 65211. Published Online:23 Oct 2018https://doi.org/10.1094/PDIS-04-18-0582-PDNAboutSectionsSupplemental ToolsAdd to favoritesDownload CitationsTrack Citations ShareShare onFacebookTwitterLinked InRedditEmailWechat An investigation of white oaks (Quercus alba) with thin crowns, branch dieback, or both was performed in Crawford and Washington counties, Missouri, during September 2015. Affected stem and branch segments were cut from each tree for examination. After debarking, isolations were performed by using a sterile scalpel to cut cubes (approximately 2 mm3) from tissues at the edges of cankers and underlying stained sapwood. Cubes were placed in quarter-strength potato dextrose agar (PDA) amended with chloramphenicol and streptomycin sulfate (100 mg/liter). A fungus frequently recovered from four of six symptomatic trees was suspected to be a Botryosphaeriaceae species based on its colony morphology, reproductive structures, and conidia (Alves et al. 2004). DNA was extracted from seven isolates, and the internal transcribed spacer (ITS) and the gene portions of nuclear ribosomal small subunit (SSU) regions were sequenced after amplification using ITS1F and ITS4 and NS1 and NS4 primers (White et al. 1990). The resulting sequences were deposited in GenBank (accession nos. MH041506 to MH041510, MH036328, and MH036329). Contigs had 100% homology with the ITS and SSU regions of multiple Diplodia corticola isolates (accession nos. KX595187.1, KT440896.1, KX463057.1, KF766239.1, and EU673206.1). Two isolates were chosen as inocula for a pathogenicity test. In a greenhouse trial, five 2-year-old seedlings were inoculated with isolate 25, and another five seedlings were inoculated with isolate 101. The fully leafed and healthy, potted seedlings were exposed to natural light. Inoculations were made by puncturing the bark of seedling stems 5 cm above the soil surface with a sterile 8-mm-diameter cork borer, peeling back the outer bark, and placing PDA bearing mycelium of either isolate into the wound. The bark was replaced and the wound wrapped with Parafilm. As a control treatment, a sterile plug of noncolonized PDA was wound inoculated 10 cm above the D. corticola inoculation site. The bark was peeled from the wounds at 8 weeks. Canker shapes were drawn on transparency film and photographed prior to measuring length and surface area with ImageJ 1.51j8 (from the National Institutes of Health). Stems were split in half and cankers measured lengthwise. Tissues were removed from the canker margin and placed in PDA for recovery of the pathogen. Vascular tissues were sampled at 0, 1, 2, and 3 cm above and below the control wound to determine if D. corticola had spread from the inoculation to the control wound. Cankers of variable sizes developed around wounds. Mean (and range) of canker areas were 4.5 cm2 ± 1.4 cm2 SE (2.3 to 9.1 cm2) for isolate 25 and 4.9 cm2 ± 1.7 cm2 SE (1.1 to 9.6 cm2) for isolate 101. The means for lengths of cankers induced by isolates 25 and 101 were 5.7 ± 0.6 and 4.6 ± 1.0 cm, respectively, when measured on stems split lengthwise. Xylem was discolored to the pith for four of five and two of five wounds inoculated with isolates 25 and 101, respectively. Cankers did not develop on wounded controls. D. corticola was recovered from canker edges from three of five seedlings for each isolate but not from sampled tissues 0, 1, 2, or 3 cm from control wounds. Hence, the pathogen did not progress far from the inoculation point. The identities of the recovered isolates were confirmed by sequencing the ITS region. This is the first report of D. corticola-caused cankers on oaks in Missouri. Earlier reports have shown that D. corticola causes cankers on Q. alba and other oak species also abundant in Missouri's oak-dominated forests (Aćimović et al. 2016; Munck et al. 2017; Smith and Stanosz 2018). The role of D. corticola in oak dieback and mortality bears further study to understand any potential impacts on oaks that are of predominant importance in Missouri forests.References:Aćimović, S. G., et al. 2016. Plant Dis. 100:649. https://doi.org/10.1094/PDIS-09-15-0994-PDN Link, ISI, Google ScholarAlves, A., et al. 2004. Mycologia 96:598. https://doi.org/10.1080/15572536.2005.11832956 Crossref, ISI, Google ScholarMunck, I. A., et al. 2017. Plant Dis. 101:257. https://doi.org/10.1094/PDIS-08-16-1118-PDN Link, ISI, Google ScholarSmith, D. R. and Stanosz, G. R. 2018. For. Path. 100:e12427. https://doi.org/10.1111/efp.12427 Google ScholarWhite, T. J., et al. 1990. Page 315 in: PCR Protocols: A Guide to Methods and Applications. Academic Press, San Diego, CA. Crossref, Google ScholarFunding: Funding was provided by Missouri Department of Conservation (grant no. 0046881) and USDA-Forest Service (grant no. 0045992).DetailsFiguresLiterature CitedRelated Vol. 102, No. 12 December 2018SubscribeISSN:0191-2917e-ISSN:1943-7692 Metrics Article History Issue Date: 20 Nov 2018Published: 23 Oct 2018First Look: 18 Jul 2018Accepted: 13 Jul 2018 Page: 2657 Information© 2018 The American Phytopathological SocietyFundingMissouri Department of ConservationGrant/Award Number: 0046881USDA-Forest ServiceGrant/Award Number: 0045992Cited byDiplodia corticolaCABI Compendium, Vol. CABI CompendiumMorphological and Phylogenetic Resolution of Diplodia corticola and D. quercivora, Emerging Canker Pathogens of Oak (Quercus spp.), in the United StatesSavannah L. Ferreira, Cameron M. Stauder, Danielle K. H. Martin, and Matt T. Kasson6 April 2021 | Plant Disease, Vol. 105, No. 5Choosing an Adequate Pesticide Delivery System for Managing Pathogens with Difficult Biologies: Case Studies on Diplodia corticola, Venturia inaequalis and Erwinia amylovora15 April 2020Botryosphaerialean fungi causing canker and dieback of tree hosts from Mount Yudu in China12 November 2019 | Mycological Progress, Vol. 18, No. 11Diversity and pathogenicity of Botryosphaeriaceae species on forest trees in the north of Iran8 May 2019 | European Journal of Forest Research, Vol. 138, No. 4

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.342
Threshold uncertainty score0.732

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.219
Teacher spread0.209 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations8
Published2018
Admission routes2
Has abstractyes

Explore more

Same venuePlant DiseaseSame topicPlant Pathogens and Fungal DiseasesFrench-language works237,207