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Record W2884010841 · doi:10.1007/s10811-018-1541-z

Inter-laboratory validation of the serial dilution culture—most probable number method for enumerating viable phytoplankton

2018· article· en· W2884010841 on OpenAlexaff
Hugh L. MacIntyre, John J. Cullen, Shannah Rastin, Magdalena Waclawik, Kimberly J. Franklin, Nicole Poulton, Laura C. Lubelczyk, Kate McPhee, Tammi L. Richardson, Elise Van Meerssche, Brian Petri

Bibliographic record

VenueJournal of Applied Phycology · 2018
Typearticle
Languageen
FieldEnvironmental Science
TopicMarine Ecology and Invasive Species
Canadian institutionsTrojan Technologies (Canada)Dalhousie University
FundersUniversity of Cambridge
KeywordsPhytoplanktonEnumerationDilutionBiologySerial dilutionFood scienceEcologyMathematicsNutrientMedicine

Abstract

fetched live from OpenAlex

The most probable number (MPN) assay is used to enumerate viable phytoplankton in the 10–50 μm size range for Type Approval of ballast water management systems. However, its validation has been questioned by the United States Coast Guard, which does not accept it as an alternative to its required method. To address key elements of method validation, three research laboratories used the same experimental protocols to enumerate viable organisms from uniformly viable and heat-killed cultures of three species of phytoplankton. Statistical analysis of the ratio of MPN estimates of viable organisms to measurements from flow cytometry was consistent with predictions based on perfect adherence to the method’s assumptions. These include reliable detection of all viable organisms and no false-positive results. The validation confirmed established estimates of the MPN method’s precision and demonstrated reproducibility, having been transferred to and implemented by two of the laboratories for the first time.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.074
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.255
Teacher spread0.247 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations9
Published2018
Admission routes1
Has abstractyes

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