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Record W2888778433 · doi:10.20381/ruor-26029

Calcium Nanodomains at Spindles

2021· preprint· en· W2888778433 on OpenAlexaff
Guolong Mo

Bibliographic record

VenueuO Research (University of Ottawa) · 2021
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMicrotubule and mitosis dynamics
Canadian institutionsOttawa Hospital
Fundersnot available
KeywordsCell biologyCalciumCalcium signalingAnaphaseMitosisSpindle apparatusMicrotubuleCytokinesisCalcium in biologyInositolBiologyChemistryMultipolar spindlesBAPTAMetaphaseBiophysicsIntracellularBiochemistryCellCell cycleCell divisionReceptor

Abstract

fetched live from OpenAlex

The spindle apparatus is arguably the most important organelle in cell division. Despite the comprehensive characterization of microtubule regulatory proteins and protein complexes in the past decades, we are still far from being able to reconstitute a functional spindle using purified components. One important question remaining unanswered is whether calcium signaling participates in spindle assembly. Calcium signaling is involved in cell division but is thought to be dispensable for spindle assembly, mainly because excessive EGTA (ethylene glycol-bis(β-aminoethyl ether)-N,N,N',N'-tetraacetic acid) is present in the popular in vitro spindle assembly system – Xenopus egg extracts. However, a recent report showed that injection of the fast calcium chelator 1,2-bis(o-aminopheyoxy)ethane-N,N,N’,N’-tetraacetic acid (BAPTA), but not the slow chelator EGTA, causes rapid depolymerization of spindle microtubules in Xenopus oocytes. Differential sensitivity to BAPTA is the defining characteristic of highly restricted, or nanodomain Ca²⁺ signaling, best known to function in presynaptic neurotransmitter release. However, no local Ca²⁺ signals have been identified to be functionally linked to spindle assembly. In this project, a novel microtubule-binding calcium sensor, TubeCamp1 (TC1), was designed to test the hypothesis that spindles are associated with calcium nanodomains. Consistent with the hypothesis, confocal imaging with TC1 revealed microtubule-proximal calcium increase at the spindle poles in Xenopus oocytes and HeLa cells. Calcium nanodomains also formed in spindles assembled in vitro and at the center of monoastral spindles, suggesting that they are a general feature of spindle assembly. Disruption of nanodomain calcium signaling, via rapid chelation of calcium or perturbation of inositol-1,4,5-trisphosphate pathway, resulted in rapid spindle disassembly in intact oocytes and in oocyte extracts. These results demonstrate the existence of spindle-associated calcium nanodomains and suggest that such domains are an important and common feature of spindles in vertebrates. In addition, a Ca²⁺ transient was identified during polar body emission in Xenopus oocytes by using a novel ratiometric probe Tubecamp4 (TC4) and mobile probes Oregon Green-2 and -6f. A close examination of its spatiotemporal pattern with membrane-targeted probes revealed that the Ca²⁺ transient was associated with polar body abscission whereby the polar body is separated from the oocyte, suggesting a role of Ca²⁺ in ensuring the correct number of chromosomes and proper division of cytoplasm. Collectively, these results expand our knowledge in highly localized Ca²⁺ control of spindle assembly and cell cycles, providing new angles for understanding disease pathology and drug intervention.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.047
GPT teacher head0.308
Teacher spread0.261 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2021
Admission routes1
Has abstractyes

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