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Record W2889489537 · doi:10.1016/j.tree.2018.08.001

Outstanding Challenges in the Transferability of Ecological Models

2018· review· en· W2889489537 on OpenAlexaff
Katherine L. Yates, Phil J. Bouchet, M. Julian Caley, Kerrie Mengersen, Christophe F. Randin, Stephen Parnell, Alan H. Fielding, Andrew J. Bamford, Stephen S. Ban, A. Márcia Barbosa, Carsten F. Dormann, Jane Elith, Clare B. Embling, Gary N. Ervin, Rebecca Fisher, Susan Gould, Roland Felix Graf, Edward J. Gregr, Patrick N. Halpin, Risto K. Heikkinen, Stefan Heinänen, Alice R. Jones, P K Krishnakumar, Valentina Lauria, Hector Lozano‐Montes, Laura Mannocci, Camille Mellin, Mohsen B. Mesgaran, Elena Moreno Amat, Sophie Mormede, Emilie Novaczek, Steffen Oppel, Guillermo Ortuño Crespo, A. Townsend Peterson, Giovanni Rapacciuolo, Jason J. Roberts, Rebecca E. Ross, Kylie L. Scales, David S. Schoeman, Paul V. R. Snelgrove, Göran Sundblad, Wilfried Thuiller, Leigh G. Torres, Heroen Verbruggen, Lifei Wang, Seth J. Wenger, Mark J. Whittingham, Yuri Zharikov, Damaris Zurell, Ana M. M. Sequeira

Bibliographic record

VenueTrends in Ecology & Evolution · 2018
Typereview
Languageen
FieldEnvironmental Science
TopicSpecies Distribution and Climate Change
Canadian institutionsParks CanadaUniversity of TorontoSciencetech (Canada)Memorial University of NewfoundlandUniversity of British ColumbiaCanadian Parks and Wilderness Society
FundersAustralian Research CouncilGoyder Institute for Water ResearchFundação para a Ciência e a TecnologiaSchweizerischer Nationalfonds zur Förderung der Wissenschaftlichen ForschungCommonwealth Scientific and Industrial Research OrganisationAustralian GovernmentU.S. NavyU.S. Department of AgricultureDepartment for Environment, Food and Rural Affairs, UK GovernmentCentre of Excellence for Environmental Decisions, Australian Research CouncilNational Science Foundation
KeywordsTransferabilityPredictabilityIdentification (biology)Computer scienceBenchmarkingQuality (philosophy)Set (abstract data type)Data scienceManagement scienceRisk analysis (engineering)EcologyMachine learningEngineeringBusinessBiologyMathematics

Abstract

fetched live from OpenAlex

Predictive models are central to many scientific disciplines and vital for informing management in a rapidly changing world. However, limited understanding of the accuracy and precision of models transferred to novel conditions (their 'transferability') undermines confidence in their predictions. Here, 50 experts identified priority knowledge gaps which, if filled, will most improve model transfers. These are summarized into six technical and six fundamental challenges, which underlie the combined need to intensify research on the determinants of ecological predictability, including species traits and data quality, and develop best practices for transferring models. Of high importance is the identification of a widely applicable set of transferability metrics, with appropriate tools to quantify the sources and impacts of prediction uncertainty under novel conditions.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.025
metaresearch head score (Gemma)0.053
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.025
Threshold uncertainty score0.133

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0250.053
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0030.002
Bibliometrics0.0020.003
Science and technology studies0.0010.007
Scholarly communication0.0050.014
Open science0.0060.005
Research integrity0.0040.009
Insufficient payload (model declined to judge)0.0070.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.248
GPT teacher head0.361
Teacher spread0.113 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designTheoretical or conceptual
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations764
Published2018
Admission routes1
Has abstractno

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