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Record W2896055240 · doi:10.3389/fnins.2018.00701

Integrating the Local Property and Topological Structure in the Minimum Spanning Tree Brain Functional Network for Classification of Early Mild Cognitive Impairment

2018· article· en· W2896055240 on OpenAlexfundno aff
Xiaohong Cui, Jie Xiang, Bin Wang, Jihai Xiao, Yan Niu, Junjie Chen

Bibliographic record

VenueFrontiers in Neuroscience · 2018
Typearticle
Languageen
FieldNeuroscience
TopicFunctional Brain Connectivity Studies
Canadian institutionsnot available
FundersNational Institute on AgingNational Institute of Biomedical Imaging and BioengineeringCanadian Institutes of Health ResearchH. Lundbeck A/SServierNational Institutes of HealthNatural Science Foundation of Shanxi ProvinceNational Natural Science Foundation of ChinaEisaiGenentechIXICONorthern California Institute for Research and EducationPfizerBiogenBioClinicaF. Hoffmann-La RocheUniversity of Southern CaliforniaEli Lilly and CompanyU.S. Department of DefenseMeso Scale DiagnosticsAlzheimer's Disease Neuroimaging InitiativeNovartis Pharmaceuticals CorporationBristol-Myers SquibbAlzheimer's AssociationFoundation for the National Institutes of Health
KeywordsComputer scienceParahippocampal gyrusMinimum spanning treeSupport vector machineFunctional connectivityPattern recognition (psychology)Cognitive impairmentProperty (philosophy)CognitionArtificial intelligenceNeurosciencePsychologyAlgorithmTemporal lobe

Abstract

fetched live from OpenAlex

Abnormalities in the brain connectivity in patients with neurodegenerative diseases, such as early mild cognitive impairment (EMCI), have been widely reported. Current research shows that the combination of multiple features of the threshold connectivity network can improve the classification accuracy of diseases. However, in the construction of the threshold connectivity network, the selection of the threshold is very important, and an unreasonable setting can seriously affect the final classification results. Recent neuroscience research suggests that the minimum spanning tree (MST) brain functional network is helpful, as it avoids the methodological biases while comparing networks. In this paper, by employing the multikernel method, we propose a framework to integrate the multiple properties of the MST brain functional network for improving the classification performance. Initially, the Kruskal algorithm was used to construct an unbiased MST brain functional network. Subsequently, the vector kernel and graph kernel were used to quantify the two different complementary properties of the network, such as the local connectivity property and the topological property. Finally, the multikernel support vector machine (SVM) was adopted to combine the two different kernels for EMCI classification. We tested the performance of our proposed method for Alzheimer's Disease Neuroimaging Initiative (ANDI) datasets. The results showed that our method achieved a significant performance improvement, with the classification accuracy of 85%. The abnormal brain regions included the right hippocampus, left parahippocampal gyrus, left posterior cingulate gyrus, middle temporal gyrus, and other regions that are known to be important in the EMCI. Our results suggested that, combining the multiple features of the MST brain functional connectivity offered a better classification performance in the EMCI.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0020.001
Science and technology studies0.0000.000
Scholarly communication0.0000.001
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.059
GPT teacher head0.283
Teacher spread0.224 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations7
Published2018
Admission routes1
Has abstractyes

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