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Record W2896066677 · doi:10.1101/448951

Mutualism outcome across plant populations, microbes, and environments in the duckweed <i>Lemna minor</i>

2018· preprint· en· W2896066677 on OpenAlexafffund
Anna O'Brien, Jason R. Laurich, Emma Lash, Megan E. Frederickson

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2018
Typepreprint
Languageen
FieldEnvironmental Science
TopicConstructed Wetlands for Wastewater Treatment
Canadian institutionsUniversity of Toronto
FundersCentre for Global Change Science, University of TorontoNatural Sciences and Engineering Research Council of CanadaUniversity of Toronto
KeywordsLemna minorBiologyMicrobial population biologyAbiotic componentPopulationTerrestrial plantEcologyPhytoremediationMicrobiomeLemnaPhyllospherePlant communityMicrobial ecologyAquatic plantBotanyMacrophyteSpecies richnessSoil waterBacteria

Abstract

fetched live from OpenAlex

Abstract The picture emerging from the rapidly growing literature on host-associated micro-biota is that host traits and fitness often depend on complex and interactive effects of host genotype, microbial interactions, and abiotic environment. However, testing these main and interactive effects typically requires large, multi-factorial experiments and thus remains challenging in many systems. Furthermore, most studies of plant microbiomes focus on terrestrial hosts and microbes. Aquatic habitats may confer unique properties to plant micriobiomes. We grew different populations of duck-weed ( Lemna minor ), a floating aquatic plant of increasing popularity in freshwater phytoremediation, in three microbial treatments (adding no, “home”, or “away” microbes) at two levels of zinc, a common water contaminant in urban areas. Thus, we simultaneously manipulated plant source population, microbial community, and the abiotic environment, and measured both plant and microbial performance as well as plant traits. Although we found little evidence of interactive effects, we found strong main effects of plant source, microbial treatment, and zinc on both duckweed and microbial growth, with significant variation among both duckweed and microbial communities. Despite strong growth alignment between duckweed and microbes, zinc consistently decreased plant growth, but increased microbial growth. Furthermore, as in recent studies of terrestrial plants, microbial interactions altered a duckweed phenotype (frond aggregation). Our results suggest that the duckweed source population, its associated microbiome, and the contaminant environment may all need to be considered in real-world phytoremediation efforts. Lastly, we propose that duckweed microbes offer a robust experimental system for study of host-microbiota interactions under a range of environmental stresses.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.006
Threshold uncertainty score0.011

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.231
Teacher spread0.212 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2018
Admission routes2
Has abstractyes

Explore more

Same venuebioRxiv (Cold Spring Harbor Laboratory)Same topicConstructed Wetlands for Wastewater TreatmentFrench-language works237,207