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Record W2896158951

Identification and characterization of a novel interaction between peroxisome-proliferator activated receptor gamma (PPARγ) and human mesoderm induction-early response 1 and potential implications for adipogenesis

2008· article· en· W2896158951 on OpenAlexaff
Amanda P. Parsons, Laura L. Gillespie, Gary D. Paterno

Bibliographic record

VenueCancer Research · 2008
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPeroxisome Proliferator-Activated Receptors
Canadian institutionsMemorial University of Newfoundland
Fundersnot available
KeywordsCoactivatorNuclear receptorAdipogenesisPeroxisome proliferator-activated receptorTroglitazoneTranscription factorCell biologyBiologyResponse elementCorepressorChemistryReceptorGene expressionBiochemistryPromoterGene
DOInot available

Abstract

fetched live from OpenAlex

1222 PPARγ is a nuclear hormone receptor and master regulator of lipid metabolism and adipogenesis. It is also the target for the thiazolidinediones, a class of drugs used in the treatment of type 2 diabetes. PPARγ regulates these processes through the recruitment of a diverse set of transcriptional coregulators (both coactivators and corepressors) in a tissue and time specific manner. This study focused on characterizing the interaction between PPARγ and human mesoderm induction early response 1 (hMI-ER1), a transcription factor that has been shown to interact with other nuclear hormone receptors and regulate target gene expression. Glutathione-S-transferase pull-down assays have revealed that PPARγ interacts with both the α and β forms of hMI-ER1, specifically through the SANT domain located near the C-termini of both protein isoforms. Coimmunoprecipitations in HEK-293 (human embryonic kidney cells) confirmed that this interaction occurs in vivo . Treatment with ligand (troglitazone) had no effect on the ability of PPAR to bind hMI-ER1 indicating that the interaction is ligand-independent. A reporter assay using luciferase regulated by the PPAR response element (PPRE) demonstrated that hMI-ER1α and β cause a 2-fold activation of PPAR-driven transcriptional activity and this was similar to the 3-fold activation observed with a known PPARγ coactivator (PPARγ coactivator 1-alpha, PGC1-α). This activation was also ligand-independent. Thus, hMI-ER1 interacts with PPAR in a ligand independent manner through its SANT domain, and causes activation of PPARγ-mediated transcriptional activity. We have recently discovered that hMI-ER1 expression is regulated in 3T3-L1 preadipocytes during their differentiation into adipocytes. Future work will determine the role of hMI-ER1 in adipogenesis using the well-established 3T3-L1 differentiation system.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.067
GPT teacher head0.367
Teacher spread0.300 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2008
Admission routes1
Has abstractyes

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