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Record W2897127142 · doi:10.1016/j.jalz.2018.06.1460

P3‐103: ATP5H, ZCCHC14, AND PRKCH AS GENETIC RISK FACTORS FOR ALZHEIMER DISEASE AND VASCULAR DEMENTIA

2018· article· en· W2897127142 on OpenAlexaffabout
Sympascho Young, Alice Fok, Ging‐Yuek Robin Hsiung

Bibliographic record

VenueAlzheimer s & Dementia · 2018
Typearticle
Languageen
FieldMedicine
TopicFolate and B Vitamins Research
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsDementiaApolipoprotein EVascular dementiaMedicineDiseaseOdds ratioGenotypeAlleleAlzheimer's diseaseInternal medicineDiabetes mellitusLogistic regressionOncologyVascular diseaseEndocrinologyGeneticsBiologyGene

Abstract

fetched live from OpenAlex

Current evidence suggests that Alzheimer disease (AD) and cerebrovascular disease (CVD) share a number of risk factors, including the well known vascular risks such as hypertension, diabetes, hypercholesterolemia, and obesity. Recent genome wide association studies revealed several novel risk loci for cerebrovascular diseases, in particular small vessels white matter disease, which often co-exists with AD. In the current study, we undertook a genetic case-control study from 3 Canadian cohorts to examine the role of ATP5H, ZCCHC14, and PRKCH in AD and vascular dementia (VaD). Patients diagnosed with AD or VaD were genotyped and compared to ethnicity-matched participants with no cognitive impairment (NCI controls). Genotypes were obtained using TaqMan assays. Allele and genotype frequencies were compared using a chi-squared test and the odds ratio was calculated using logistic regression, adjusting for covariates such as age, sex, and APOE genotype. There were 636 controls, 667 AD, and 118 VaD cases in the combined cohort. In the unadjusted analysis, there was no significant association with the risk genes to AD or VaD. When stratified by APOE carrier status, we found evidence of association between PRKCH with AD (p=0.023), but not VaD (P=0.462), in non APOE-e4 carriers. Our findings suggest that PRKCH may modulate risk of AD in non-APOE-e4 carriers. Lack of power may affect the ability to detect association with VaD. Larger scale studies and further investigations between vascular risks and AD may provide novel target for therapeutic intervention.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.326
Threshold uncertainty score0.648

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.000
Scholarly communication0.0010.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0030.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.032
GPT teacher head0.309
Teacher spread0.277 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2018
Admission routes2
Has abstractyes

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