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Record W2898229024 · doi:10.1111/geb.12821

Tundra Trait Team: A database of plant traits spanning the tundra biome

2018· article· en· W2898229024 on OpenAlexafffundabout
Anne D. Bjorkman, Isla H. Myers‐Smith, Sarah C. Elmendorf, Signe Normand, Haydn J. D. Thomas, Juha M. Alatalo, Heather D. Alexander, Alba Anadon‐Rosell, Sandra Angers‐Blondin, Yang Bai, Gaurav Baruah, Mariska te Beest, Logan T. Berner, Robert G. Björk, Daan Blok, Helge Bruelheide, Agata Buchwał, Allan Buras, Michele Carbognani, Katherine S. Christie, Laura S. Collier, Elisabeth J. Cooper, J. Hans C. Cornelissen, Katharine J. M. Dickinson, Stefan Dullinger, Bo Elberling, Anu Eskelinen, Bruce C. Forbes, Esther R. Frei, Maitane Iturrate‐Garcia, Megan Good, Oriol Grau, Peter Green, Michelle Greve, Paul Grogan, Sylvia Haider, Tomáš Hájek, Martin Hallinger, Konsta Happonen, Karen A. Harper, Monique Heijmans, Gregory H. R. Henry, Luise Hermanutz, Rebecca E. Hewitt, Robert D. Hollister, James M. Hudson, Karl Hülber, Colleen M. Iversen, Francesca Jaroszynska, Borja Jiménez‐Alfaro, Jill F. Johnstone, Rasmus Halfdan Jørgensen, Elina Kaarlejärvi, Rebecca A Klady, Jitka Klimešová, Annika C. Korsten, Sara Kuleza, Aino Kulonen, Laurent J. Lamarque, Trevor C. Lantz, Amanda Lavalle, Jonas J. Lembrechts, Esther Lévesque, Chelsea J. Little, Miska Luoto, Petr Macek, Michelle C. Mack, Rabia Mathakutha, Anders Michelsen, Ann Milbau, Ulf Molau, John W. Morgan, Martin Alfons Mörsdorf, Jacob Nabe‐Nielsen, Sigrid Schøler Nielsen, Josep M. Ninot, Steven F. Oberbauer, Johan Olofsson, V. G. Onipchenko, Alessandro Petraglia, Catherine Marina Pickering, Janet S. Prevéy, Christian Rixen, Sabine B. Rumpf, Gabriela Schaepman‐Strub, Philipp Semenchuk, Rohan Shetti, Nadejda A. Soudzilovskaia, Marko J. Spasojevic, James D. M. Speed, Lorna E. Street, Katharine N. Suding, Ken D. Tape, Marcello Tomaselli, Andrew J. Trant, Urs A. Treier, Jean‐Pierre Tremblay, Mathieu Tremblay, Susanna Venn, Anna‐Maria Virkkala, Tage Vowles, Stef Weijers, Martin Wilmking, Sonja Wipf, Tara Zamin

Bibliographic record

VenueGlobal Ecology and Biogeography · 2018
Typearticle
Languageen
FieldEarth and Planetary Sciences
TopicClimate change and permafrost
Canadian institutionsUniversité LavalMemorial University of NewfoundlandUniversity of WaterlooDalhousie UniversityUniversité du Québec à Trois-RivièresUniversity of VictoriaUniversity of SaskatchewanUniversity of British ColumbiaSurrey Memorial HospitalSaint Mary's UniversityCenter for Northern StudiesQueen's University
FundersNatural Environment Research CouncilNatural Sciences and Engineering Research Council of CanadaUniversität ZürichFonds Wetenschappelijk OnderzoekU.S. Fish and Wildlife ServiceAarhus UniversitetU.S. Department of EnergyCarlsbergfondetNorges ForskningsrådAcademy of FinlandNederlandse Organisatie voor Wetenschappelijk OnderzoekSight Research UKArcticNetSchweizerischer Nationalfonds zur Förderung der Wissenschaftlichen ForschungVetenskapsrådetVillum FondenDanmarks Frie ForskningsfondNational Science Foundation
KeywordsTundraBiomeTraitEcologyGeographyBiologyEcosystemComputer science

Abstract

fetched live from OpenAlex

Abstract Motivation The Tundra Trait Team (TTT) database includes field‐based measurements of key traits related to plant form and function at multiple sites across the tundra biome. This dataset can be used to address theoretical questions about plant strategy and trade‐offs, trait–environment relationships and environmental filtering, and trait variation across spatial scales, to validate satellite data, and to inform Earth system model parameters. Main types of variable contained The database contains 91,970 measurements of 18 plant traits. The most frequently measured traits (> 1,000 observations each) include plant height, leaf area, specific leaf area, leaf fresh and dry mass, leaf dry matter content, leaf nitrogen, carbon and phosphorus content, leaf C:N and N:P, seed mass, and stem specific density. Spatial location and grain Measurements were collected in tundra habitats in both the Northern and Southern Hemispheres, including Arctic sites in Alaska, Canada, Greenland, Fennoscandia and Siberia, alpine sites in the European Alps, Colorado Rockies, Caucasus, Ural Mountains, Pyrenees, Australian Alps, and Central Otago Mountains (New Zealand), and sub‐Antarctic Marion Island. More than 99% of observations are georeferenced. Time period and grain All data were collected between 1964 and 2018. A small number of sites have repeated trait measurements at two or more time periods. Major taxa and level of measurement Trait measurements were made on 978 terrestrial vascular plant species growing in tundra habitats. Most observations are on individuals (86%), while the remainder represent plot or site means or maximums per species. Software format csv file and GitHub repository with data cleaning scripts in R; contribution to TRY plant trait database ( www.try-db.org ) to be included in the next version release.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.003
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Dataset · Consensus signal: Dataset
Teacher disagreement score0.018
Threshold uncertainty score0.035

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.003
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0050.009
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0070.007

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.022
GPT teacher head0.234
Teacher spread0.213 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreDataset

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations97
Published2018
Admission routes3
Has abstractyes

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