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Record W2901360099 · doi:10.3389/fpls.2018.01643

Detection of Cistanches Herba (Rou Cong Rong) Medicinal Products Using Species-Specific Nucleotide Signatures

2018· article· en· W2901360099 on OpenAlexaff
Xiaoyue Wang, Rong Xu, Jun Chen, Jingyuan Song, Steven-G Newmaster, Jianping Han, Zheng Zhang, Shilin Chen

Bibliographic record

VenueFrontiers in Plant Science · 2018
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicEssential Oils and Antimicrobial Activity
Canadian institutionsUniversity of Guelph
FundersNational Natural Science Foundation of China
KeywordsBiologyMedicinal plantsBotanyTraditional medicineChemistryMedicine

Abstract

fetched live from OpenAlex

Cistanches Herba is a medicinal plant with tonification properties commonly used in Asia. Due to the imbalance of demand and supply, adulterants are frequently added for profit. However, there is no regulatory oversight because quality control tools are not sufficient to identify heavily processed products. Thus, a novel molecular tool based on nucleotide signatures and species-specific primers was developed. The ITS2 regions from 251 Cistanches Herba and adulterant samples were sequenced. Based on SNP sites, four nucleotide signatures within 30~37 bp and six species-specific primers were developed. In addition, they were validated by artificial experimental mixtures of six different species and different ratios. This method was also applied to detect 66 Cistanches Herba products on the market, including extracts and Chinese patent medicines. The results demonstrated the utility of nucleotide signatures in identifying adulterants in mixtures. Market study exposed 36.4% adulteration, of which 19.7% were adulterated with Cynomorium songaricum or Cistanche sinensis, and 16.7% were substituted with Cy. songaricum, Ci. sinensis or Boschniakia rossica. The results also revealed Cy. songaricum as the most common adulterant in the market. Thus, we recommend the use of species-specific nucleotide signatures for regulating adulteration and verifying medicinal product supply chain quality assurance, especially for processed products with degraded DNA.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.072
Threshold uncertainty score0.449

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.020
GPT teacher head0.207
Teacher spread0.187 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations18
Published2018
Admission routes1
Has abstractyes

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