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Record W2902167120 · doi:10.1002/cpt.1323

Effect of <i> <scp>CYP</scp> 4F2 </i> , <i> <scp>VKORC</scp> 1 </i> , and <i> <scp>CYP</scp> 2C9 </i> in Influencing Coumarin Dose: A Single‐Patient Data Meta‐Analysis in More Than 15,000 Individuals

2018· review· en· W2902167120 on OpenAlexafffund
Elisa Danese, Sara Raimondi, Martina Montagnana, Angela Tagetti, Taimour Langaee, Paola Borgiani, Cinzia Ciccacci, Antonio J. Carcas, Alberto M. Borobia, Hoi Y. Tong, Cristina Lucía Dávila-Fajardo, Mariana Rodrigues Botton, Stéphane Bourgeois, Panos Deloukas, Michael D. Caldwell, J. K. Burmester, Richard L. Berg, Larisa H. Cavallari, Katarzyna Drozda, Min Huang, Lizi Zhao, Hanjing Cen, Rocío Gónzález‐Conejero, Vanessa Roldán, Yusuke Nakamura, Taisei Mushiroda, Inna Y. Gong, Richard B. Kim, Keita Hirai, Kunihiko Itoh, Carlos Alberto Arias, Leonardo Beltrán, Enrique Jiménez‐Varo, Marisa Cañadas‐Garre, Alice Giontella, Marianne Kristiansen Kringen, Kari Bente Foss Haug, Hye Sun Gwak, Kyung Eun Lee, Pietro Minuz, Ming Ta Michael Lee, Steven A. Lubitz, Stuart A. Scott, Cristina Mazzaccara, Lucia Sacchetti, E. Genç, Mahmut Özer, Anil Pathare, Rajagopal Krishnamoorthy, Andràs Páldi, Virginie Siguret, Marie‐Anne Loriot, Vijay Kumar Kutala, Guilherme Suarez‐Kurtz, Jamila Alessandra Perini, Joshua C. Denny, Andrea H. Ramirez, Balraj Mittal, Saurabh Singh Rathore, Hersh Sagreiya, Russ B. Altman, Mohamed H. Shahin, Sherief Khalifa, Nita A. Limdi, Charles Rivers, Aditi Shendre, Chrisly Dillon, Ivet Suriapranata, Honghao Zhou, Shenglan Tan, Vacis Tatarūnas, Vaiva Lesauskaitė, Yumao Zhang, Anke H. Maitland‐van der Zee, Talitha I. Verhoef, Anthonius de Boer, Monica Taljaard, Carlo‐Federico Zambon, Vittorio Pengo, Jieying Eunice Zhang, Munir Pirmohamed, Julie A. Johnson

Bibliographic record

VenueClinical Pharmacology & Therapeutics · 2018
Typereview
Languageen
FieldPharmacology, Toxicology and Pharmaceutics
TopicPharmacogenetics and Drug Metabolism
Canadian institutionsOttawa HospitalUniversity of OttawaWestern University
FundersNational Cancer InstituteNational Heart, Lung, and Blood InstituteQueen's University BelfastQueen's UniversityBritish Heart FoundationNational Institute of General Medical SciencesMedical Research CouncilNational Institute for Health and Care Research
KeywordsDosingCoumarinPharmacologyAcenocoumarolConfidence intervalMeta-analysisMedicineCytochrome P450Internal medicineChemistryMetabolism

Abstract

fetched live from OpenAlex

The cytochrome P450 (CYP)4F2 gene is known to influence mean coumarin dose. The aim of the present study was to undertake a meta-analysis at the individual patients level to capture the possible effect of ethnicity, gene-gene interaction, or other drugs on the association and to verify if inclusion of CYP4F2*3 variant into dosing algorithms improves the prediction of mean coumarin dose. We asked the authors of our previous meta-analysis (30 articles) and of 38 new articles retrieved by a systematic review to send us individual patients' data. The final collection consists of 15,754 patients split into a derivation and validation cohort. The CYP4F2*3 polymorphism was consistently associated with an increase in mean coumarin dose (+9% (95% confidence interval (CI) 7-10%), with a higher effect in women, in patients taking acenocoumarol, and in white patients. The inclusion of the CYP4F2*3 in dosing algorithms slightly improved the prediction of stable coumarin dose. New pharmacogenetic equations potentially useful for clinical practice were derived.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.017
metaresearch head score (Gemma)0.002
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Science and technology studies, Open science, Research integrity
Consensus categoriesMeta-epidemiology (narrow), Research integrity
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Meta-analysis · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.611
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0170.002
Meta-epidemiology (narrow)0.0040.003
Meta-epidemiology (broad)0.0140.004
Bibliometrics0.0030.005
Science and technology studies0.0010.004
Scholarly communication0.0000.001
Open science0.0060.004
Research integrity0.0050.009
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.304
GPT teacher head0.516
Teacher spread0.213 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designMeta-analysis
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations32
Published2018
Admission routes2
Has abstractyes

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