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The pK's of Cardiolipins Are Altered by the Number and Position of their Specific Fatty Acid Esters

2008· article· en· W29066124 on OpenAlexaff
Thomas H. Haines, Richard M. Epand, Raquel F. Epand

Bibliographic record

VenueThe FASEB Journal · 2008
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMitochondrial Function and Pathology
Canadian institutionsMcMaster University
Fundersnot available
KeywordsCardiolipinCardiolipinsChemistryTitrationStereochemistryMembraneFatty acidPiCrystallographyBiochemistryPhospholipidOrganic chemistry

Abstract

fetched live from OpenAlex

We’ve confirmed that the 2 phosphate groups of tetrastearoyl‐cardiolipin (CL) have distinctly different pK values, one above neutrality. Although CL's chemical structure, suggests that it has 2 identical negative charge at neutral pH, our data shows it does not. Previously (Kates et al. (1993) Lipids , 28 , 877–882), showed the pK 2 was >8.0 with the tetrastearoyl CL, we have examined the dependence of the titration of cardiolipin on the number and nature of the acyl chains. The high pK 2 varies, with the chainlength and desaturation of the chains on the lipid. As the chain structure is varied, the pK 2 ranges from 3–8. The latter dominates with C 18 chains. Short chains yield lower pK 2 's e.g., E. coli CL. Typical mitochondrial CL's have 4 linoleoyl chains. The high pK 2 is explained by a bicyclic, H‐bonded conformation of CL's headgroup. Evidence for this has been provided by showing that deoxycardiolipin, lacking the central OH of the connecting glycerol, has a pK 2 below 4.0. This data supports the proposal that CL has a role in ATP synthesis by providing a pool of protons on both sides of the membrane for proton pumping (Haines & Dencher (2003) FEBS Lett. 528 , 35–39). Our results show the high pK 2 , present in tetramyristoyl cardiolipin is missing in myristoyl lysocardiolipin. A chemical test for the often fatal Barth's Syndrome is lysocardiolipin. Our results may be relevant to this genetic disease which may have defective ATP synthesis.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.223
Teacher spread0.208 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2008
Admission routes1
Has abstractyes

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