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Record W2906873235 · doi:10.1101/235234

A Comprehensive Evaluation of the Genetic Architecture of Sudden Cardiac Arrest

2017· article· en· W2906873235 on OpenAlexfundno aff
Foram N. Ashar, Rebecca Mitchell, Christine M. Albert, Christopher Newton‐Cheh, Jennifer A. Brody, Martina Müller‐Nurasyid, Anna Moes, Thomas Meitinger, Angel C. Y. Mak, Heikki V. Huikuri, Juhani Junttila, Philippe Goyette, Sara L. Pulit, Raha Pazoki, MichaelW. Tanck, Marieke T. Blom, Xiaoqing Zhao, Reza Jabbari, Charlotte Glinge, Vinicius Tragante, Stefan Andersson Escher, Aravinda Chakravarti, Georg Ehret, Josef Coresh, Man Li, Ronald J. Prineas, Oscar H. Franco, Pui–Yan Kwok, Thomas Lumley, Florence Dumas, Barbara McKnight, Jerome I. Rotter, Rozenn N. Lemaître, Susan R. Heckbert, Christopher J. O’Donnell, Shih‐Jen Hwang, Jean‐Claude Tardif, Martin VanDenburgh, André G. Uitterlinden, Albert Hofman, Bruno H. Stricker, Paul I. W. de Bakker, Paul W. Franks, Jan-Håkan Jansson, Folkert W. Asselbergs, Marc K. Halushka, Joseph J. Maleszewski, Jacob Tfelt‐Hansen, Thomas Engstrøm, Veikko Salomaa, Renu Virmani, Frank D. Kolodgie, Arthur A.M. Wilde, Hanno L. Tan, Connie R. Bezzina, Mark Eijgelsheim, John D. Rioux, Xavier Jouven, Bruce M. Psaty, David S. Siscovick, Dan E. Arking, Nona Sotoodehnia

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2017
Typearticle
Languageen
FieldMedicine
TopicCardiovascular Effects of Exercise
Canadian institutionsnot available
FundersNational Heart, Lung, and Blood InstituteFondation Institut de Cardiologie de MontréalCenter for Translational Molecular MedicineNederlandse Organisatie voor Wetenschappelijk OnderzoekErasmus Medisch CentrumInstitut de Cardiologie de MontréalDanmarks GrundforskningsfondCollege ter Beoordeling van GeneesmiddelenHelmholtz Zentrum MünchenBundesministerium für Bildung und ForschungAcademy of FinlandRigshospitaletZonMwInstitut National de la Santé et de la Recherche MédicaleEuropean CommissionFondation LeducqNational Cancer InstituteNational Research FoundationMinistry of Earth SciencesUS-UK Fulbright Commission
KeywordsSudden cardiac arrestSudden cardiac deathMedicineComputer scienceInternal medicine

Abstract

fetched live from OpenAlex

ABSTRACT Background Sudden cardiac arrest (SCA) accounts for 10% of adult mortality in Western populations. While several risk factors are observationally associated with SCA, the genetic architecture of SCA in the general population remains unknown. Furthermore, understanding which risk factors are causal may help target prevention strategies. Methods We carried out a large genome-wide association study (GWAS) for SCA (n=3,939 cases, 25,989 non-cases) to examine common variation genome-wide and in candidate arrhythmia genes. We also exploited Mendelian randomization methods using cross-trait multi-variant genetic risk score associations (GRSA) to assess causal relationships of 18 risk factors with SCA. Results No variants were associated with SCA at genome-wide significance, nor were common variants in candidate arrhythmia genes associated with SCA at nominal significance. Using cross-trait GRSA, we established genetic correlation between SCA and (1) coronary artery disease (CAD) and traditional CAD risk factors (blood pressure, lipids, and diabetes), (2) height and BMI, and (3) electrical instability traits (QT and atrial fibrillation), suggesting etiologic roles for these traits in SCA risk. Conclusions Our findings show that a comprehensive approach to the genetic architecture of SCA can shed light on the determinants of a complex life-threatening condition with multiple influencing factors in the general population. The results of this genetic analysis, both positive and negative findings, have implications for evaluating the genetic architecture of patients with a family history of SCA, and for efforts to prevent SCA in highrisk populations and the general community.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0020.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.251
Teacher spread0.234 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2017
Admission routes1
Has abstractyes

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