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Record W2907669909 · doi:10.1126/science.aan1425

DNA fragility in the parallel evolution of pelvic reduction in stickleback fish

2019· article· en· W2907669909 on OpenAlexaff
Kathleen T. Xie, Guliang Wang, Abbey C Thompson, Julia Wücherpfennig, T. E. Reimchen, Andrew D. C. MacColl, Dolph Schluter, Michael A. Bell, Karen M. Vásquez, David M. Kingsley

Bibliographic record

VenueScience · 2019
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic diversity and population structure
Canadian institutionsUniversity of British ColumbiaUniversity of Victoria
FundersNational Institute of General Medical SciencesNational Science FoundationNational Institutes of HealthNational Cancer InstituteNational Human Genome Research InstituteHoward Hughes Medical Institute
KeywordsSticklebackFish <Actinopterygii>FragilityReduction (mathematics)FisheryBiologyZoologyChemistryMathematics

Abstract

fetched live from OpenAlex

DNA breakage and adaptation Adaptation to new environments often occurs in similar ways across different colonization events. Stickleback fish represent a classic example of this, in which repeated colonizations of freshwater have resulted in the loss of pelvic hind fins. Previous work has shown that a pelvic enhancer gene is involved. Xie et al. now show that this gene lies within a region of the genome that is prone to double-stranded DNA breakage owing to a high thymine-guanine content. This enhanced region of breakage could lead to enhanced mutation rates that facilitate repeated adaptations to new environments. Science , this issue p. 81

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.470
Threshold uncertainty score0.108

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.235
Teacher spread0.227 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations227
Published2019
Admission routes1
Has abstractyes

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