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Record W2911251990 · doi:10.1107/s0108767318099154

Defining the dynamics behind ryanodine receptor modulation by small molecules

2018· article· en· W2911251990 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueActa Crystallographica Section A Foundations and Advances · 2018
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicChemical and Physical Studies
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsRyanodine receptorModulation (music)Dynamics (music)BiophysicsChemistryChemical physicsReceptorPhysicsBiologyBiochemistryAcoustics

Abstract

fetched live from OpenAlex

Ryanodine receptors (RyRs) are calcium release channels that mediate the rapid release of calcium from the endoplasmic/sarcoplasmic reticulum into the cytosol. RyRs are essential for excitation-contraction coupling and are modulated by numerous auxiliary proteins and small molecules. There are over 200 reported mutations within the channel's skeletal isoform (RyR1) associated with altered channel function. However the molecular mechanism by which these mutations influence RyR1 response to channel's many modulators remains unclear. We employed mass spectrometry and cryo-electron microscopy to identify the direct and long-range allosteric consequences of ligand binding within RyR1. We determined that ligand binding within RyR1 regions, despite being distinct from mutated residue, are likely responsible for the altered function. These findings further support that significant long-range cooperatively across RyR1 domains is required for normal channel activity.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.983
Threshold uncertainty score0.409

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.233
Teacher spread0.228 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it