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Record W2920790267 · doi:10.3899/jrheum.180503

Presence of Antitopoisomerase I Antibody Alone May Not Be Sufficient for the Diagnosis of Systemic Sclerosis

2019· letter· en· W2920790267 on OpenAlexvenueno aff
Anne E. Tebo, Robert L. Schmidt, Tracy Frech

Bibliographic record

VenueThe Journal of Rheumatology · 2019
Typeletter
Languageen
FieldMedicine
TopicSystemic Sclerosis and Related Diseases
Canadian institutionsnot available
FundersDepartment of Pathology, University of UtahNational Institute of Arthritis and Musculoskeletal and Skin DiseasesARUP LaboratoriesU.S. Department of Veterans Affairs
KeywordsMedicineSystemic diseaseAntibodyScleroderma (fungus)ImmunopathologyImmunologyMultiple sclerosisDermatology

Abstract

fetched live from OpenAlex

Systemic sclerosis (SSc) is characterized by altered immune function and vascular damage, which lead to extensive fibrosis. Experts underscore the importance of using SSc-specific autoantibodies to divide the disease into subsets for prognosis, management, and research1,2. One representative feature of the immunological abnormalities in patients with SSc is the presence of antinuclear antibodies (ANA) associated with autoantibody targets. The anticentromere (ACA), antitopoisomerase I (anti–topo I), anti-RNA polymerase I/III (ARA I/III), and anti-Th/To constitute about 80–85% of autoantibodies specific for SSc and can assist the physician in assessment3,4,5. The 2013 classification criteria for SSc provide 3 points (toward a 9-point diagnosis) for patients who test positive for anti-ACA, anti-ARA III, or anti–topo I antibodies1. All 3 classical autoantibodies remain stable throughout the course of disease and tend to have a mutually exclusive association. While the presence of anti–topo I antibodies is thought to be highly specific and diagnostic for SSc, the significance of certain positive results remains unclear6,7. Since the development of ELISA to detect anti–topo I antibodies, a number of different … Address correspondence to Dr. T.M. Frech, University of Utah, Internal Medicine, 30 N. 1900 E., Salt Lake City, Utah 84132, USA. E-mail: tracy.frech{at}hsc.utah.edu

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.005
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Commentary · Consensus signal: none
Teacher disagreement score0.012
Threshold uncertainty score0.041

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.005
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0020.001
Science and technology studies0.0010.001
Scholarly communication0.0010.002
Open science0.0010.000
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.0120.007

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.044
GPT teacher head0.295
Teacher spread0.251 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreCommentary

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2019
Admission routes1
Has abstractyes

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