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Record W2921860734 · doi:10.1093/jcag/gwz006.280

A281 RISK FACTORS ASSOCIATED WITH PROGRESSION OF BARRETT’S ESOPHAGUS, LOW GRADE DYSPLASIA & HIGH GRADE DYSPLASIA TO ESOPHAGEAL ADENOCARCINOMA

2019· article· en· W2921860734 on OpenAlexaff
Daljeet Chahal, Steven Pi, Sinead N. Duggan, Fergal Donnellan, Robert Enns

Bibliographic record

VenueJournal of the Canadian Association of Gastroenterology · 2019
Typearticle
Languageen
FieldMedicine
TopicEsophageal Cancer Research and Treatment
Canadian institutionsSt. Paul's HospitalVancouver General HospitalUniversity of British Columbia
Fundersnot available
KeywordsMedicineDysplasiaInternal medicineBarrett's esophagusEsophagusGastroenterologyMalignancyRisk factorEsophageal adenocarcinomaAdenocarcinomaCancer

Abstract

fetched live from OpenAlex

Barrett’s Esophagus (BE) is a known risk factor for development of Low Grade Dysplasia (LGD), High Grade Dysplasia (HGD) and ultimately Esophageal Adenocarcinoma (EAC). Only a small minority of patients with BE progress to LGD, HGD or EAC and it remains difficult to predict those at higher risk. As such, current screening methods for BE have resulted in only modest mortality benefit and are not thought to be cost-effective. The purpose of this study was to investigate characteristics of patients with BE at St. Paul’s Hospital, in order to help predict those who may be at higher risk of progression to EAC. A retrospective chart review of all LGD, HGD and EAC diagnosed at St. Paul’s Hospital from 2012–2016 was conducted. The list of all patients LGD, HGD and EAC was obtained through St. Paul’s Hospital Department of Pathology after ethics approval. 132 patients met inclusion criteria. There 47 (35.6%) patients with no dysplasia, 29 (22.0%) with LGD, 35 (26.5%) with HGD and 21 (15.9%) with EAC as their highest risk pathology. There were 24 (18.2%) female patients and 108 (81.8%) male. Compared with non-EAC (No dysplasia, LGD or HGD), patients with EAC had higher rate of smoking history (52.4% vs. 20.7%, p=0.002), higher rate of prior malignancy of any type (33.3% vs. 8.1 %, p=0.001), older mean age at time of BE diagnosis (71.0 +/- 8.3 vs. 61.3 +/- 12.2, p=0.001), and greater rate of mucosal irregularity (nodularity, ulceration, structuring) at time of endoscopy (85.7% vs. 28.8%, p<0.001). Patients with EAC also had greater incidence of family history of breast cancer (22.2% vs. 6.2%, p=0.027) and lung cancer (23.5% vs. 4.1%, p=0.004) compared to those without EAC. Patients with and without EAC did not differ in terms of alcohol use (71.4% vs. 70.3%), p=0.915), reflux symptoms (85.7% vs. 91.9%, p=0.367), presence of esophagitis (LA grade) (4.8% vs. 7.2%, p=0.684), presence of hiatal hernia (85.0% vs. 83.8%, p=0.891), or family history of esophageal cancer (11.8% vs. 13.4%, p=0.854). Patients with BE who developed EAC had higher incidence of smoking, prior malignancy, family history of lung or breast CA, and mucosal irregularity as well as older age at diagnosis of BE compared to those who did not develop EAC. They did not differ in incidence of alcohol use, reflux symptoms, esophagitis, hiatal hernia or family history of esophageal cancer. Identifying Barrett’s patients who are at higher risk of developing EAC remains difficult and recent data suggest that mass screening and surveillance protocols have had limited impact on mortality. Our data provides clarity about risk factors that may aid in determining which patients would benefit from earlier screening or increased frequency of surveillance. None

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.006
Threshold uncertainty score0.012

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0030.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.261
Teacher spread0.248 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2019
Admission routes1
Has abstractyes

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