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Record W2922043930 · doi:10.1126/science.aav4040

The genomic history of the Iberian Peninsula over the past 8000 years

2019· article· en· W2922043930 on OpenAlexaff
Íñigo Olalde, Swapan Mallick, Nick Patterson, Nadin Rohland, Vanessa Villalba‐Mouco, Marina Silva, Katharina Dulias, Ceiridwen J. Edwards, Francesca Gandini, Maria Pala, Pedro Soares, Manuel Ferrando-Bernal, Nicole Adamski, Nasreen Broomandkhoshbacht, Olivia Cheronet, Brendan J. Culleton, Daniel Fernandes, Ann Marie Lawson, Matthew Mah, Jonas Oppenheimer, Kristin Stewardson, Zhao Zhang, Juan Manuel Jiménez Arenas, Isidro Jorge Toro Moyano, Domingo C. Salazar‐García, Pere Castanyer, Marta Santos, Joaquim Tremoleda i Trilla, Marina Lozano, Pablo García Borja, Javier Fernández Eraso, José Antonio Mujika Alustiza, Cecilio Barroso Ruíz, Francisco Javier Parra Bermúdez, Enrique Viguera, Josep Burch, Neus Coromina, David Vivó i Codina, Artur Cebrià, Josep María Fullola i Pericot, Oreto García Puchol, Juan Ignacio Morales, F. Xavier Oms, Tona Majó, Josep María Vergès, Antònia Díaz-Carvajal, Imma Ollich-Castanyer, F. Javier López-Cachero, Ana María Silva, Carmen Alonso Fernández, Germán Delibes de Castro, Javier Jiménez Echevarría, Adolfo Moreno Márquez, Guillermo Pascual Berlanga, Pablo Ramos‐García, José Ramos Muñoz, Eduardo Vijande Vila, Gustau Aguilella, Ángel Esparza Arroyo, Katina T. Lillios, Jennifer Mack, Javier Velasco Vázquez, A.J. Waterman, Luis Benítez de Lugo Enrich, María Benito Sánchez, Bibiana Agustí, Ferran Grau i Codina, Gabriel de Prado, Almudena Estalrrich, Álvaro Fernández Flores, Clive Finlayson, Geraldine Finlayson, Stewart Finlayson, Francisco Giles Guzmán, Antonio Rosas, Virginia Barciela González, Gabriel García Atiénzar, Mauro S. Hernández Pérez, Armando Llanos, Yolanda Carrión Marco, Isabel Beneyto, David López Serrano, Mario Sanz Tormo, António Carlos Valera, Concepción Blasco, Corina Liesau von Lettow‐Vorbeck, Patricia Ríos Mendoza, Joan Daura, María Jesús de Pedro Michó, Agustín Diez Castillo, Raúl Flores Fernández, Joan Francès i Farré, Rafael Garrido Peña, Victor S. Gonçalves, Elisa Guerra Doce, Ana Mercedes Herrero Corral, Joaquim Juan-Cabanilles, Dani López, Sarah B. McClure, Marta Pérez, Arturo Oliver Foix, Montserrat Sanz, Ana Catarina Sousa, Julio Manuel Vidal Encinas, Douglas J. Kennett, Martin Richards, Kurt W. Alt, Wolfgang Haak, Ron Pinhasi, Carles Lalueza‐Fox, David Reich

Bibliographic record

VenueScience · 2019
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicForensic and Genetic Research
Canadian institutionsUniversity of Toronto
FundersNational Institute of General Medical SciencesEuropean Regional Development FundFundação para a Ciência e a TecnologiaAgència de Gestió d'Ajuts Universitaris i de RecercaNational Science FoundationNational Institutes of HealthGeneralitat de CatalunyaLeverhulme Trust
KeywordsPeninsulaPrehistoryAncient DNAGlobeHistoryArchaeologyGeographyGenetic dataPerspective (graphical)GenomicsGenealogyEvolutionary biologyGenomeBiologyGeneticsDemographyArtPopulationGene

Abstract

fetched live from OpenAlex

We assembled genome-wide data from 271 ancient Iberians, of whom 176 are from the largely unsampled period after 2000 BCE, thereby providing a high-resolution time transect of the Iberian Peninsula. We document high genetic substructure between northwestern and southeastern hunter-gatherers before the spread of farming. We reveal sporadic contacts between Iberia and North Africa by ~2500 BCE and, by ~2000 BCE, the replacement of 40% of Iberia's ancestry and nearly 100% of its Y-chromosomes by people with Steppe ancestry. We show that, in the Iron Age, Steppe ancestry had spread not only into Indo-European-speaking regions but also into non-Indo-European-speaking ones, and we reveal that present-day Basques are best described as a typical Iron Age population without the admixture events that later affected the rest of Iberia. Additionally, we document how, beginning at least in the Roman period, the ancestry of the peninsula was transformed by gene flow from North Africa and the eastern Mediterranean.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.023
Threshold uncertainty score0.045

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0030.004
Science and technology studies0.0010.000
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.232
Teacher spread0.226 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations579
Published2019
Admission routes1
Has abstractyes

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