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Record W2929775752 · doi:10.3897/neobiota.44.31650

Consistency of impact assessment protocols for non-native species

2019· article· en· W2929775752 on OpenAlexaff
Pablo González‐Moreno, Lorenzo Lazzaro, Montserrat Vilà, Cristina Preda, Tim Adriaens, Sven Bacher, Giuseppe Brundu, Gordon H. Copp, Franz Essl, Emili García‐Berthou, Stelios Katsanevakis, Toril Loennechen Moen, Frances Lucy, Wolfgang Nentwig, Helen E. Roy, Greta Srėbalienė, Venche Talgø, Sonia Vanderhoeven, Ana Andjelković, Кęstutis Arbačiauskas, Marie‐Anne Auger‐Rozenberg, Mi‐Jung Bae, Michel Bariche, Pieter Boets, Mário Boieiro, Paulo A. V. Borges, João Canning‐Clode, Federico Cardigos, Niki Chartosia, Elizabeth Cook, Fabio Crocetta, Bram D’hondt, Bruno Foggi, Swen Follak, Belinda Gallardo, Øivind Gammelmo, Sylvaine Giakoumi, Claudia Giuliani, Guillaume Fried, Lucija Šerić Jelaska, Jonathan M. Jeschke, Miquel Jover, Alejandro Juárez‐Escario, Stefanos Kalogirou, Aleksandra Kočić, Eleni Kytinou, Ciaran Laverty, Vanessa Lozano, Alberto Maceda‐Veiga, Elizabete Marchante, Hélia Marchante, Angeliki F. Martinou, S. Meyer, Dan Minchin, Ana Montero‐Castaño, Maria Cristina Morais, Carmen Morales‐Rodríguez, Naida Muhthassim, Zoltán Á. Nagy, ̧Nikica Ogris, Hüseyin Önen, Jan Pergl, Riikka Puntila-Dodd, Wolfgang Rabitsch, Triya Tessa Ramburn, Carla Rego, Fabian Reichenbach, Carmen Romeralo, Wolf‐Christian Saul, Gritta Schrader, Rory Sheehan, Predrag Simonović, Marius Skolka, António O. Soares, Leif Sundheim, Ali Serhan Tarkan, R. Tomov, Elena Tricarico, Konstantinos Tsiamis, Ahmet Uludağ, J.L.C.H. van Valkenburg, Hugo Verreycken, Anna Maria Vettraino, Øystein Wiig, Johanna Witzell, Andrea Zanetta, Marc Kenis

Bibliographic record

VenueNeoBiota · 2019
Typearticle
Languageen
FieldEnvironmental Science
TopicAnimal Ecology and Behavior Studies
Canadian institutionsSimon Fraser University
FundersAustralian Centre for International Agricultural ResearchAgence Nationale de la RechercheDeutsche ForschungsgemeinschaftEuropean Cooperation in Science and TechnologyFundação para a Ciência e a TecnologiaBiodiversa+
KeywordsConsistency (knowledge bases)Protocol (science)Similarity (geometry)Computer scienceMedicineArtificial intelligence

Abstract

fetched live from OpenAlex

Standardized tools are needed to identify and prioritize the most harmful non-native species (NNS). A plethora of assessment protocols have been developed to evaluate the current and potential impacts of non-native species, but consistency among them has received limited attention. To estimate the consistency across impact assessment protocols, 89 specialists in biological invasions used 11 protocols to screen 57 NNS (2614 assessments). We tested if the consistency in the impact scoring across assessors, quantified as the coefficient of variation (CV), was dependent on the characteristics of the protocol, the taxonomic group and the expertise of the assessor. Mean CV across assessors was 40%, with a maximum of 223%. CV was lower for protocols with a low number of score levels, which demanded high levels of expertise, and when the assessors had greater expertise on the assessed species. The similarity among protocols with respect to the final scores was higher when the protocols considered the same impact types. We conclude that all protocols led to considerable inconsistency among assessors. In order to improve consistency, we highlight the importance of selecting assessors with high expertise, providing clear guidelines and adequate training but also deriving final decisions collaboratively by consensus.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.183
metaresearch head score (Gemma)0.256
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.183
Threshold uncertainty score0.969

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.1830.256
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0050.003
Science and technology studies0.0020.003
Scholarly communication0.0030.003
Open science0.0040.005
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.028
GPT teacher head0.356
Teacher spread0.329 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations61
Published2019
Admission routes1
Has abstractyes

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