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Record W2931411496 · doi:10.1039/c9cp00857h

Prediction of the near-IR spectra of ices by<i>ab initio</i>molecular dynamics

2019· article· en· W2931411496 on OpenAlexfundno aff
Rafael Escribano, Pedro C. Gómez, Belén Maté, Germán Molpeceres, Emilio Artacho

Bibliographic record

VenuePhysical Chemistry Chemical Physics · 2019
Typearticle
Languageen
FieldPhysics and Astronomy
TopicAdvanced Chemical Physics Studies
Canadian institutionsnot available
FundersMinisterio de Educación, Cultura y DeporteXunta de GaliciaMinisterio de Ciencia, Tecnología e Innovación ProductivaWestern Canada Research Grid
KeywordsMolecular dynamicsAb initioSpectral lineComputational chemistryAb initio quantum chemistry methodsChemical physicsDynamics (music)Materials scienceChemistryStatistical physicsPhysicsMoleculeQuantum mechanicsOrganic chemistry

Abstract

fetched live from OpenAlex

A method to predict the near-infrared spectra of amorphous solids by means of ab initio molecular dynamics is presented. These solids can simulate molecular ices. To test the method, mixtures of methane, water and nitrogen are generated as amorphous samples of various concentrations. The full theoretical treatment includes as a first step, the optimization of their geometrical structure for a range of densities, after which, the most stable systems are taken as initial structures for molecular dynamics, performed at 200 K in trajectories of 4 ps duration with a 0.2 fs time step. All the dynamics are carried out using the first principles method, solving the quantum problem for the electrons using density-functional theory (DFT), and integrating the DFT forces, following the Born-Oppenheimer dynamics. After the dynamics, near-IR spectra are predicted by the Fourier transform of the macroscopic polarization autocorrelation function. The calculated spectra are compared with the experimental spectra of ice mixtures of CH4 and H2O recorded in our laboratory, and with some spectra recorded by the New Horizons mission on Pluto.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.209
Teacher spread0.204 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2019
Admission routes1
Has abstractyes

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