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Record W2933329562 · doi:10.1094/pdis-03-19-0499-pdn

First Report of Leaf Curl on Celery (<i>Apium graveolens</i> var. <i>dulce</i>) Caused by <i>Colletotrichum fioriniae</i> in New York

2019· article· en· W2933329562 on OpenAlexaboutno aff
Sandeep Sharma, Sarah J. Pethybridge, Elizabeth Buck, Frank S. Hay

Bibliographic record

VenuePlant Disease · 2019
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Pathogens and Fungal Diseases
Canadian institutionsnot available
FundersNational Institute of Food and Agriculture
KeywordsApium graveolensBiologyBotanyHorticulture

Abstract

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HomePlant DiseaseVol. 103, No. 7First Report of Leaf Curl on Celery (Apium graveolens var. dulce) Caused by Colletotrichum fioriniae in New York PreviousNext DISEASE NOTES OPENOpen Access licenseFirst Report of Leaf Curl on Celery (Apium graveolens var. dulce) Caused by Colletotrichum fioriniae in New YorkS. Sharma, S. J. Pethybridge, E. M. Buck, and F. S. HayS. Sharmahttp://orcid.org/0000-0003-1921-1310Plant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell AgriTech, Cornell University, Geneva, NY, 14456, S. J. Pethybridgehttp://orcid.org/0000-0003-3864-4293Plant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell AgriTech, Cornell University, Geneva, NY, 14456, E. M. BuckCornell Vegetable Program, Cornell Cooperative Extension, East Aurora, NY, 14052, and F. S. Hay†Corresponding author: F. S. Hay; E-mail Address: [email protected]Plant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell AgriTech, Cornell University, Geneva, NY, 14456AffiliationsAuthors and Affiliations S. Sharma1 S. J. Pethybridge1 E. M. Buck2 F. S. Hay1 † 1Plant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell AgriTech, Cornell University, Geneva, NY, 14456 2Cornell Vegetable Program, Cornell Cooperative Extension, East Aurora, NY, 14052 Published Online:20 May 2019https://doi.org/10.1094/PDIS-03-19-0499-PDNAboutSectionsSupplemental ToolsAdd to favoritesDownload CitationsTrack Citations ShareShare onFacebookTwitterLinked InRedditEmailWechat An outbreak of foliar disease on celery cultivar Tango was reported in Erie County, New York, in September 2018. Disease incidence was approximately 85%. Diseased plants were stunted and twisted, and older leaves were downward curling. Brown to orange-colored lesions were observed on the margins of leaves and stalks, and chlorotic spots were present on the upper surface of leaves. Microscopic observation of the lesions on the leaves and stems identified acervuli typical of Colletotrichum spp. Conidia from acervuli were spread on 2% water agar (plus 0.02% w/v ampicillin) and incubated at 20°C. Cultures were transferred onto potato dextrose agar (PDA; Difco Laboratories, Detroit, MI). After 7 to 10 days, gray-colored colonies with pink conidiomata typical of Colletotrichum spp. were observed (Damm et al. 2012). Twenty isolations were conducted from diseased celery leaves and stalks, resulting in the same fungus. Conidia (n = 50) of an isolate Cl18-03 were cylindrical, 8.84 μm (6.66 to 10.77 μm) long and 3.63 μm (2.86 to 4.22 μm) wide, and slightly tapered on one end. To confirm the identity of the isolate, polymerase chain reaction was performed to amplify the internal transcribed spacer (ITS) region, actin (ACT), and portions of the glyceraldehyde-3-phosphate dehydrogenase (GAPDH) genes using primer pairs ITS1/ITS4 (White et al. 1990), Act512F/Act738R (Carbone and Kohn 1999), and GDF1/GDR1 (Templeton et al. 1992), respectively. Pairwise alignment of the sequences showed 99.8% similarity within the ITS and 100% similarity to the GAPDH and ACT sequences of C. fioriniae ex holotype CBS128517. Sequences of the isolate Cl18-03 were deposited in GenBank with accession numbers MK558808 (ITS), MK558809 (ACT), and MK558810 (GAPDH). For pathogenicity testing, Cl18-03 was grown on 0.2× PDA at room temperature and a 16-h photoperiod. Conidia were harvested after 7 days by flooding the plate with sterile type I water (ultrapure). The conidial suspension was passed through double-layered cheese cloth. Spores were counted, and the suspension was diluted to 1 × 106 (plus 0.01% polysorbate-20) spores/ml. Five celery plants of cultivar Tango were sprayed with the inoculum until run-off. After inoculation, the plants were covered with a plastic bag for 96 h. Similarly, noninoculated control plants were sprayed with 0.01% polysorbate-20 and bagged. Plants were placed in a misting chamber and exposed to alternating 25°C light/18°C dark temperatures with a 16-h photoperiod. Mist was applied for an hour every day to maintain at least 85% relative humidity. After 8 days, symptoms of leaf curl including marginal and necrotic spots on the petiole were observed on all inoculated plants with complete collapse in two of the five inoculated plants. No symptoms were observed in the control plants. Symptomatic leaves were detached and placed in a moist chamber for 2 days, and brown acervuli without setae were observed in 75% of the lesions. Spores isolated from the lesions showed similar morphology and dimensions to the original isolate. To our knowledge this is the first report of C. fioriniae on celery associated with leaf curl in New York. The pathogen appears to be emerging in importance and previously reported on garlic in New York (Hay et al. 2018). Leaf curl is also an emerging, serious disease of celery reported in surrounding states including Ontario (Canada; Reynolds et al. 2019), Pennsylvania (Pollok et al. 2012), and Michigan (Rodriguez-Salamanca et al. 2015) and in Australia (Heaton and Dullahide 1993; Wright and Heaton 1991), and considering the low tolerance of disease, it may represent a significant threat to celery production in New York.The author(s) declare no conflict of interest.References:Carbone, I., and Kohn, L. M. 1999. Mycologia 91:553. https://doi.org/10.2307/3761358 Crossref, ISI, Google ScholarDamm, U., et al. 2012. Stud. Mycol. 73:37. https://doi.org/10.3114/sim0010 Crossref, ISI, Google ScholarHay, F. S., et al. 2018. New Dis. Rep. 38:1. https://doi.org/10.5197/j.2044-0588.2018.038.001 Crossref, Google ScholarHeaton, J. B., and Dullahide, S. R. 1993. Australas. Plant Pathol. 22:152. https://doi.org/10.1071/APP9930152 Crossref, Google ScholarPollok, J. R., et al. 2012. Plant Dis. 96:1692 https://doi.org/10.1094/PDIS-03-12-0271-PDN Link, ISI, Google ScholarReynolds, S., et al. 2019. Can. J. Plant Pathol. 41:160. Google ScholarRodriguez-Salamanca, L. M., et al. 2015. Plant Dis. 99:1832. https://doi.org/10.1094/PDIS-09-14-0994-RE Link, Google ScholarTempleton, M. D., et al. 1992. Gene 122:225. https://doi.org/10.1016/0378-1119(92)90055-T Crossref, ISI, Google ScholarWhite, T. J., et al. 1990. Page 315 in: PCR Protocols: A Guide to Methods and Applications. Academic Press, San Diego, CA. Crossref, Google ScholarWright, D. G., and Heaton, J. B. 1991. Australas. Plant Pathol. 20:155. https://doi.org/10.1071/APP9910155 Crossref, Google ScholarThe author(s) declare no conflict of interest.Funding: Funding was provided by National Institute of Food and Agriculture (USDA NIFA Hatch Project NYG-625424).DetailsFiguresLiterature CitedRelated Vol. 103, No. 7 July 2019SubscribeISSN:0191-2917e-ISSN:1943-7692 DownloadCaptionApple cultivar Joya Cripps Red lesions caused by Colletotrichum fructicola (Nodet et al.). Photo credit: P. Nodet. Symptoms of Lotus powdery mildew caused by Erysiphe takamatsui (Zhou et al.). Photo credit: C. Liang. Symptoms of tar spot (Phyllachora maydis) on maize leaves (Dalla Lana et al.). Photo credit: F. Dalla Lana. Metrics Article History Issue Date: 20 Jun 2019Published: 20 May 2019First Look: 2 Apr 2019Accepted: 31 Mar 2019 Pages: 1791-1791 Information© 2019 The American Phytopathological SocietyFundingNational Institute of Food and AgricultureGrant/Award Number: USDA NIFA Hatch Project NYG-625424Keywordsfoliar diseasecelerydisease managementThe author(s) declare no conflict of interest.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Case report · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.041
Threshold uncertainty score0.082

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0060.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.204
Teacher spread0.194 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designCase report
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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