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Record W2937654715 · doi:10.1101/614008

The role of diffusion and perivascular spaces in dynamic susceptibility contrast MRI

2019· preprint· en· W2937654715 on OpenAlexaff
J. Ronald Doucette, Christian Kames, Enedino Hernández‐Torres, Anthony Traboulsee, Alexander Rauscher

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2019
Typepreprint
Languageen
FieldMedicine
TopicAdvanced Neuroimaging Techniques and Applications
Canadian institutionsUniversity of British ColumbiaUniversity of British Columbia Hospital
Fundersnot available
KeywordsWhite matterDiffusion MRIContrast (vision)VoxelIsotropyNuclear magnetic resonanceOrientation (vector space)AnisotropyPhysicsDiffusionMagnetic resonance imagingMathematicsGeometryMedicineOpticsRadiology

Abstract

fetched live from OpenAlex

Abstract We investigated the effects of brain tissue orientation, diffusion, and perivascular spaces on dynamic susceptibility contrast MRI. A 3D numerical model of a white matter voxel was created that consists of an isotropic capillary bed and anisotropic vessels that run in parallel with white matter tracts and are surrounded by perivascular spaces. The signal within the voxel was simulated by solving the Bloch-Torrey equation. Experimental perfusion data were acquired with a gradient echo dynamic susceptibility contrast scan. White matter fibre orientation was mapped with diffusion tensor imaging. Our numerical model of the contrast agent induced increase in R 2 * , as a function of tissue orientation, was fit to dynamic susceptibility contrast MRI data from thirteen subjects by minimizing the bias-corrected Akaike information criterion. White matter blood volume fraction in both the isotropic and the anisotropic vessels was determined as a free parameter, and results were analyzed as a function of diffusivity and perivascular space size. Total white matter blood volume was found to be 2.57%, with one third of the blood residing in blood vessels that run parallel with white matter tracts. Gradient echo dynamic susceptibility contrast MRI strongly depended on white matter tissue orientation and, according to the numerical simulations, this effect is amplified by diffusion and perivascular spaces.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.007
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.007
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0010.001
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.258
Teacher spread0.246 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2019
Admission routes1
Has abstractyes

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