Conserved mitochondrial genome organization of <i>Isospora</i> species (<i>Eimeriidae,</i> Coccidia, <i>Apicomplexa</i>) infecting reptiles (<i>Pogona vitticeps</i> (<i>Sauria: Agamidae</i>) and birds (<i>Garrulax chinensis</i> Aves: passeriformes)
Bibliographic record
Abstract
Complete mitochondrial genomes of Isospora amphiboluri and an unnamed Isospora sp. (Eimeriidae, Coccidia, Apicomplexa) were sequenced. These coccidia infect the bearded dragon, Pogona vitticeps (Sauria: Agamidae) and black-throated laughingthrush Garrulax chinensis (Aves: Passeriformes), respectively. Genome organization and gene content were conventional. The circular-mapping mt genomes of I. amphiboluri (6264 bp) and unnamed Isospora sp. (6225 bp) each contained three protein-coding genes (COI, COIII, and CytB), 17 gene fragments encoding large subunit (LSU) rRNA and 14 gene fragments encoding small subunit (SSU) rRNA. Like other apicomplexan parasites, no tRNA was encoded by either genome. The comparable mitochondrial genome sequences and structures of Isospora and Eimeria species confirm the close relationship between these eimeriid genera of apicomplexan parasites.
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How this classification was reachedexpand
Full frame distilled prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.
Codex and Gemma teacher scores by category
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.001 | 0.001 |
| Meta-epidemiology (narrow) | 0.001 | 0.000 |
| Meta-epidemiology (broad) | 0.001 | 0.000 |
| Bibliometrics | 0.000 | 0.002 |
| Science and technology studies | 0.001 | 0.000 |
| Scholarly communication | 0.000 | 0.001 |
| Open science | 0.001 | 0.001 |
| Research integrity | 0.001 | 0.001 |
| Insufficient payload (model declined to judge) | 0.002 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one teacher head, not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".