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Record W2939234892 · doi:10.1056/nejmoa1806627

Glutaminase Deficiency Caused by Short Tandem Repeat Expansion in <i>GLS</i>

2019· article· en· W2939234892 on OpenAlexafffund
André B. P. Kuilenburg, Maja Tarailo‐Graovac, Phillip A. Richmond, Britt I. Drögemöller, Mahmoud A. Pouladi, René Leen, Koroboshka Brand‐Arzamendi, Doreen Dobritzsch, Egor Dolzhenko, Michael A. Eberle, Bruce E. Hayward, Meaghan J. Jones, Farhad Karbassi, Michael S. Kobor, Janet Koster, Daman Kumari, Meng Li, Julia L. MacIsaac, Cassandra McDonald, Judith Meijer, Charlotte Nguyen, Indhu‐Shree Rajan‐Babu, Stephen W. Scherer, Bernice Sim, Brett Trost, Laura A. Tseng, Marjolein Turkenburg, Joke J.F.A. van Vugt, Jan H. Veldink, Jagdeep S. Walia, Youdong Wang, Michel van Weeghel, Galen E.B. Wright, Xiaohong Xu, Ryan K. C. Yuen, Jinqiu Zhang, Colin J.D. Ross, Wyeth W. Wasserman, Michael T. Geraghty, Saikat Santra, Ronald J. A. Wanders, Xiao‐Yan Wen, Hans R. Waterham, Karen Usdin, Clara D. van Karnebeek

Bibliographic record

VenueNew England Journal of Medicine · 2019
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMetabolism and Genetic Disorders
Canadian institutionsHospital for Sick ChildrenUniversity of British ColumbiaSt. Michael's HospitalSickKids FoundationUniversity of TorontoBC Children's HospitalAlberta Children's HospitalChildren's Hospital of Eastern OntarioUniversity of CalgaryUniversity of Ottawa
FundersCanadian Institutes of Health ResearchHealth CanadaAlberta Children's Hospital Research InstituteNatural Sciences and Engineering Research Council of CanadaFondation Brain CanadaAlberta Children's Hospital FoundationBC Children’s Hospital FoundationMichael Smith Health Research BCStichting MetakidsNational Ataxia FoundationNational Institutes of HealthChildren's Hospital FoundationGenome CanadaGenome British Columbia
KeywordsTrinucleotide repeat expansionAtaxiaBiologyGeneticsExome sequencingTandem repeatUntranslated regionGenomeAlleleRNAGeneMutationNeuroscience

Abstract

fetched live from OpenAlex

repeat. Our discovery underscores the importance of careful examination of regions of the genome that are typically excluded from or poorly captured by exome sequencing.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Case report · Consensus signal: Case report
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0010.001
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.240
Teacher spread0.233 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designCase report
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations105
Published2019
Admission routes2
Has abstractyes

Explore more

Same venueNew England Journal of MedicineSame topicMetabolism and Genetic DisordersFrench-language works237,207