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Record W2939578820 · doi:10.1080/07060661.2019.1592228

Leaf blight on okra caused by <i>Choanephora cucurbitarum</i> in China

2019· article· en· W2939578820 on OpenAlexvenueno aff
Peiqing Liu, Jinzhu Zhang, Rongbo Wang, Benjin Li, Qinghe Chen, Qiyong Weng

Bibliographic record

VenueCanadian Journal of Plant Pathology · 2019
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Pathogens and Fungal Diseases
Canadian institutionsnot available
FundersNatural Science Foundation of Fujian Province
KeywordsBiologyBlightAbelmoschusPhylogenetic treeInternal transcribed spacerIntergenic regionCropPhylogenetic relationshipBotanyPathogenicityHorticultureGeneAgronomyGeneticsGenome

Abstract

fetched live from OpenAlex

Okra (Abelmoschus esculentus (L.) Moench) is an economically important vegetable crop that is widely cultivated in the tropics for its nutritional properties. There are concerns, though, that in China, commercial okra production is at risk from an emerging leaf blight disease, that has been recently observed in Fujian Province. Fungi were isolated from diseased okra leaves collected in 2016 and 89 fungal isolates were tentatively identified as Choanephora cucurbitarum based on cultural and sporangia characters. DNA sequences of the internal transcribed spacer (ITS) region and the D1/D2 region of the large subunit (LSU) of the rRNA gene from two representative isolates (C6 and C7) were 99% identical to those of C. cucurbitarum obtained from NCBI. Phylogenetic analysis based on the ITS sequences showed that C6 and C7 clustered with C. cucurbitarum. All 89 fungal isolates were found to be pathogenic to okra leaves. We provide the first confirmation that, based on morphological, pathogenicity and phylogenetic analyses, the causal agent of leaf blight of okra in China was C. cucurbitarum.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.064
Threshold uncertainty score0.127

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.004
GPT teacher head0.186
Teacher spread0.181 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations9
Published2019
Admission routes1
Has abstractyes

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