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Record W2941864567 · doi:10.1002/ece3.5211

Convergent evolution of body color between sympatric freshwater fishes via different visual sensory evolution

2019· article· en· W2941864567 on OpenAlexfundno aff
Javier Montenegro, Koji Mochida, Kumi Matsui, Daniel F. Mokodongan, Bayu Kreshna Adhitya Sumarto, Sjamsu Alam Lawelle, Andy B. Nofrianto, Renny K. Hadiaty, Kawilarang W. A. Masengi, Lengxob Yong, Nobuyuki Inomata, Takahiro Irie, Yasuyuki Hashiguchi, Yohey Terai, Jun Kitano, Kazunori Yamahira

Bibliographic record

VenueEcology and Evolution · 2019
Typearticle
Languageen
FieldEnvironmental Science
TopicFish biology, ecology, and behavior
Canadian institutionsnot available
FundersJapan Society for the Promotion of ScienceKementerian Riset, Teknologi dan Pendidikan TinggiUniversitas Sam RatulangiLembaga Ilmu Pengetahuan IndonesiaUniversity of the RyukyusInstitute of GeneticsNational Institute of GeneticsNational Science Foundation
KeywordsSympatric speciationConvergent evolutionBiologyEvolutionary biologyTaxonOpsinPhylogenetic treeZoologyGenusPhylogeneticsEcologyGeneGeneticsBotanyRhodopsin

Abstract

fetched live from OpenAlex

Abstract Although there are many examples of color evolution potentially driven by sensory drive, only few studies have examined whether distinct species inhabiting the same environments evolve similar body colors via shared sensory mechanisms. In this study, we tested whether two sympatric freshwater fish taxa, halfbeaks of the genus Nomorhamphus and ricefishes of the genus Oryzias in Sulawesi Island, converge in both body color and visual sensitivity. After reconstructing the phylogeny separately for Nomorhamphus and Oryzias using transcriptome‐wide sequences, we demonstrated positive correlations of body redness between these two taxa across environments, even after phylogenetic corrections, which support convergent evolution. However, substantial differences were observed in the expression profiles of opsin genes in the eyes between Nomorhamphus and Oryzias . Particularly, the expression levels of the long wavelength‐sensitive genes were negatively correlated between the taxa, indicating that they have different visual sensitivities despite living in similar light environments. Thus, the convergence of body colorations between these two freshwater fish taxa was not accompanied by convergence in opsin sensitivities. This system presents a case in which body color convergence can occur between sympatric species via different mechanisms.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.222
Teacher spread0.214 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations11
Published2019
Admission routes1
Has abstractyes

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