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Record W2942818276 · doi:10.1038/s41436-019-0459-4

Correction: BOADICEA: a comprehensive breast cancer risk prediction model incorporating genetic and nongenetic risk factors

2019· erratum· en· W2942818276 on OpenAlexaff
Andrew Lee, Nasim Mavaddat, Amber N. Hurson, Alex Cunningham, Tim Carver, Simon Hartley, Chantal Babb de Villiers, Á. Izquierdo, Jacques Simard, Marjanka K. Schmidt, Fiona M Walter, Nilanjan Chatterjee, Montserrat García‐Closas, Marc Tischkowitz, Paul D.P. Pharoah, Douglas F. Easton, Antonis C. Antoniou

Bibliographic record

VenueGenetics in Medicine · 2019
Typeerratum
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicBioinformatics and Genomic Networks
Canadian institutionsUniversité LavalCentre hospitalier universitaire de Québec
FundersCancer Research UK
KeywordsRegretBreast cancerComputer scienceR packageMedicineCancerMachine learningInternal medicineProgramming language

Abstract

fetched live from OpenAlex

Correction to: Genetics in Medicinehttps://doi.org/10.1038/s41436-018-0406-9; published online 15 January 2019 The original version of this article contained a typographical error in Eq. 2. The summation in the equation should run up to μ=6, and so Eq. 2 should have readλ(i)(t)=λ0(t)exp∑μ=16βMGμ(t)+∑ρβRFρμ(t)·zRFρ(i)∏ν=1μ-11-Gν(i)Gμ(i)+βPG(t)xP(i), where μ=6 corresponds to a noncarrier of pathogenic variants in the major genes, with βMG6(t)=0, and G6(i)=1 for noncarriers of pathogenic variants, and 0 otherwise. All presented results and conclusions were based on the correct version of the equation and are not influenced by this typographical error. This has now been corrected in both the PDF and HTML versions of the Article. The authors regret this error. BOADICEA: a comprehensive breast cancer risk prediction model incorporating genetic and nongenetic risk factorsGenetics in MedicineVol. 21Issue 8PreviewBreast cancer (BC) risk prediction allows systematic identification of individuals at highest and lowest risk. We extend the Breast and Ovarian Analysis of Disease Incidence and Carrier Estimation Algorithm (BOADICEA) risk model to incorporate the effects of polygenic risk scores (PRS) and other risk factors (RFs). Full-Text PDF Open Access

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.672
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.243
Teacher spread0.232 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations31
Published2019
Admission routes1
Has abstractyes

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