MétaCan
Menu
Back to cohort
Record W2944666543 · doi:10.1002/minf.201800110

QSPRs for Molecular Diffusion Coefficients in Polymeric Passive Samplers: A Comparison of Simple Molecular and Quantum‐mechanical Sigma‐moment Descriptors

2019· article· en· W2944666543 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.

Bibliographic record

VenueMolecular Informatics · 2019
Typearticle
Languageen
FieldComputer Science
TopicComputational Drug Discovery Methods
Canadian institutionsTrent University
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsQuantitative structure–activity relationshipMolecular descriptorLow-density polyethyleneMean squared errorCorrelation coefficientChemistryMoment (physics)DiffusionComputational chemistryMathematicsPolyethyleneThermodynamicsOrganic chemistryStereochemistryStatisticsPhysics

Abstract

fetched live from OpenAlex

Abstract Linear quantitative structure‐property relationships (QSPRs) for the prediction of diffusion coefficients (log D p ) were developed for organic contaminants in two common passive sampler materials, polydimethylsiloxane (PDMS) and low‐density polyethylene (LDPE). Literature data was compiled for both PDMS and LDPE resulting in final data sets of 196 and 79 compounds, respectively. Data sets contained compounds with log D p values that ranged over about 5 log units and 3 log units for PDMS and LDPE, respectively. The quality of log D p prediction using either simple molecular descriptors or quantum‐chemical based COSMO‐RS sigma moment descriptors was compared for both materials. For PDMS, the sigma moment descriptor QSPR had the best predictivity with a correlation coefficient of R 2 =0.85 and root mean square error (RMSE) of 0.36 for log D p . The molecular descriptor QSPR resulted in a correlation coefficient of R 2 =0.78 and RMSE of 0.45 for log D p . For LDPE, the molecular descriptor QSPR had the best predictivity, with the final correlation coefficient of R 2 =0.86 and RMSE of 0.21 for log D p . The sigma moment descriptor QSPR resulted in a correlation coefficient of R 2 =0.66 and RMSE of 0.33 for log D p . The purely electronic structure‐based sigma moments are therefore shown to be a viable option for descriptors compared to the more commonly used molecular descriptors for organic contaminants in PDMS. The significance of the descriptors in each QSPR is discussed.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.527
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.300
Teacher spread0.284 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it