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Prosit: proteome-wide prediction of peptide tandem mass spectra by deep learning

2019· article· en· 979 citations· W2947763854 on OpenAlex· 10.1038/s41592-019-0426-7

Why is this work in the frame?

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

Canadian affiliationAn author listed a Canadian institution. This is the only route the usual frame has.

Machine scores (provisional)

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Opus teacher head0.007
GPT teacher head0.314
Teacher spread
0.307 · how far apart the two teachers sit on this one work
Validation status
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Abstract

No abstract. This is not a gap in this database — OpenAlex has none either. 23.3% of the frame is in this state, and the screen finds HALF as much metaresearch here, so the absence is a measured bias rather than a missing field.

The record

Venue
Nature Methods
Topic
Advanced Proteomics Techniques and Applications
Field
Chemistry
Canadian institutions
IONICS Mass Spectrometry (Canada)
Funders
Bundesministerium für Bildung und ForschungAgence Nationale de la RechercheNvidia
Keywords
Tandem mass spectrometryDatabase search engineProteomeComputer scienceBottom-up proteomicsProteomicsComputational biologyMass spectrometryPeptideDeep learningArtificial intelligenceChemistryChromatographySearch engineProtein mass spectrometryBiologyBiochemistryInformation retrieval
Has abstract in OpenAlex
no