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Record W2952735543 · doi:10.1109/tmi.2019.2905770

Standardized Assessment of Automatic Segmentation of White Matter Hyperintensities and Results of the WMH Segmentation Challenge

2019· article· en· W2952735543 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.

Bibliographic record

VenueIEEE Transactions on Medical Imaging · 2019
Typearticle
Languageen
FieldComputer Science
TopicMedical Image Segmentation Techniques
Canadian institutionsUniversity of GuelphUniversity of British ColumbiaMontreal Neurological Institute and HospitalToronto Metropolitan UniversityUniversity of CalgaryMcGill University
FundersNational Institute of Biomedical Imaging and BioengineeringNational Institute of Allergy and Infectious DiseasesNational Institutes of HealthHotchkiss Brain Institute, University of CalgaryUniversitair Medisch Centrum UtrechtInstitute for Basic ScienceDaegu Gyeongbuk Institute of Science and TechnologyUniversity College London Hospitals NHS Foundation TrustTélécom ParisMultiple Sclerosis SocietyMinistry of Advanced EducationSchweizerische Multiple Sklerose GesellschaftMinisterio de Ciencia y TecnologíaUniversity of British ColumbiaHuazhong University of Science and TechnologyNatural Sciences and Engineering Research Council of CanadaMinisterio de Economía y CompetitividadLeids Universitair Medisch CentrumNational Natural Science Foundation of ChinaNational Research Foundation of KoreaMinisterio de Educación, Cultura y DeporteSun Yat-sen UniversityCoordenação de Aperfeiçoamento de Pessoal de Nível SuperiorZonMwSchweizerischer Nationalfonds zur Förderung der Wissenschaftlichen ForschungEuropean Regional Development FundKing's College LondonNational Research FoundationAlzheimer SocietyNational Institute for Health and Care ResearchNederlandse Organisatie voor Wetenschappelijk OnderzoekTechnische Universität MünchenCanadian Institutes of Health ResearchAlzheimer's SocietyInselspital, Universitätsspital BernHotchkiss Brain InstituteSkolkovo Institute of Science and TechnologyMinistry of Advanced Education and Skills DevelopmentBrigham and Women's HospitalNational University Health SystemNvidiaMinistry of EducationUniversity of BernUniversité Paris-SaclayUniversiteit UtrechtUniversität BaselUniversity of DundeeMcGill UniversityUniversitat Politècnica de CatalunyaSungkyunkwan UniversityUniversitat de GironaUniversity College LondonVrije Universiteit AmsterdamNational Science Foundation
KeywordsSegmentationHyperintensityArtificial intelligenceRobustness (evolution)ScannerComputer scienceFluid-attenuated inversion recoveryPercentileHausdorff distancePattern recognition (psychology)Image segmentationSørensen–Dice coefficientComputer visionMathematicsMagnetic resonance imagingStatisticsMedicineRadiology

Abstract

fetched live from OpenAlex

Quantification of cerebral white matter hyperintensities (WMH) of presumed vascular origin is of key importance in many neurological research studies. Currently, measurements are often still obtained from manual segmentations on brain MR images, which is a laborious procedure. The automatic WMH segmentation methods exist, but a standardized comparison of the performance of such methods is lacking. We organized a scientific challenge, in which developers could evaluate their methods on a standardized multi-center/-scanner image dataset, giving an objective comparison: the WMH Segmentation Challenge. Sixty T1 + FLAIR images from three MR scanners were released with the manual WMH segmentations for training. A test set of 110 images from five MR scanners was used for evaluation. The segmentation methods had to be containerized and submitted to the challenge organizers. Five evaluation metrics were used to rank the methods: 1) Dice similarity coefficient; 2) modified Hausdorff distance (95th percentile); 3) absolute log-transformed volume difference; 4) sensitivity for detecting individual lesions; and 5) F1-score for individual lesions. In addition, the methods were ranked on their inter-scanner robustness; 20 participants submitted their methods for evaluation. This paper provides a detailed analysis of the results. In brief, there is a cluster of four methods that rank significantly better than the other methods, with one clear winner. The inter-scanner robustness ranking shows that not all the methods generalize to unseen scanners. The challenge remains open for future submissions and provides a public platform for method evaluation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.835
Threshold uncertainty score0.366

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.293
Teacher spread0.282 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it