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Record W2969618603 · doi:10.1101/746388

Atrous Convolution with Transfer Learning for Skin Lesions Classification

2019· preprint· en· W2969618603 on OpenAlexaff
Md. Aminur Rab Ratul, M. Hamed Mozaffari, Enea Parimbelli, WonSook Lee

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2019
Typepreprint
Languageen
FieldMedicine
TopicCutaneous Melanoma Detection and Management
Canadian institutionsUniversity of Ottawa
Fundersnot available
KeywordsArtificial intelligenceSkin lesionDeep learningSkin cancerMelanomaTransfer of learningConvolution (computer science)LesionComputer scienceMedicineContextual image classificationPattern recognition (psychology)CancerMachine learningDermatologyImage (mathematics)PathologyArtificial neural networkInternal medicine

Abstract

fetched live from OpenAlex

Abstract Skin cancer is a crucial public health issue and by far the most usual kind of cancer specifically in the region of North America. It is estimated that in 2019, only because of melanoma nearly 7,230 people will die, and 192,310 cases of malignant melanoma will be diagnosed. Nonetheless, nearly all types of skin lesions can be treatable if they can be diagnosed at an earlier stage. The accurate prediction of skin lesions is a critically challenging task even for vastly experienced clinicians and dermatologist due to a little distinction between surrounding skin and lesions, visual resemblance between melanoma and other skin lesions, fuddled lesion border, etc. A well-grounded automated computer-aided skin lesions detection system can help clinicians immensely to prognosis malignant skin lesion in the earliest possible time. From the past few years, the emergence of machine learning and deep learning in the medical imaging has produced several image-based classification systems in the medical field and these systems perform better than traditional image processing classification methods. In this paper, we proposed a popular deep learning technique namely atrous or, dilated convolution for skin lesions classification, which is known to have enhanced accuracy with the same amount of computational cost compared to traditional CNN. To implement atrous convolution we choose the transfer learning technique with several popular deep learning architectures such as VGG16, VGG19, MobileNet, and InceptionV3. To train, validate, and test our proposed models we utilize HAM10000 dataset which contains total 10015 dermoscopic images of seven different skin lesions (melanoma, melanocytic nevi, Basal cell carcinoma, Benign keratosis-like lesions, Dermatofibroma, Vascular lesions, and Actinic keratoses). Four of our proposed dilated convolutional frameworks show promising outcome on overall accuracy and per-class accuracy. For example, overall test accuracy achieved 87.42%, 85.02%, 88.22%, and 89.81% on dilated VGG16, dilated VGG19, dilated MobileNet, and dilated IncaptionV3 respectively. These dilated convolutional models outperformed existing networks in both overall accuracy and individual class accuracy. Among all the architectures dilated InceptionV3 shows superior classification accuracy and dilated MobileNet is also achieving almost impressive classification accuracy like dilated InceptionV3 with the lightest computational complexities than all other proposed model. Compared to previous works done on skin lesions classification we have experimented one of the most complicated open-source datasets with class imbalances and achieved better accuracy (dilated inceptionv3) than any known methods to the best of our knowledge.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.792
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.020
GPT teacher head0.232
Teacher spread0.211 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations9
Published2019
Admission routes1
Has abstractyes

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