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Record W2974704311 · doi:10.1038/s41590-019-0492-0

Denisovan, modern human and mouse TNFAIP3 alleles tune A20 phosphorylation and immunity

2019· article· en· W2974704311 on OpenAlexaff
Nathan W. Zammit, Owen M. Siggs, Paul Gray, Keisuke Horikawa, D.B. Langley, Stacey N. Walters, Stephen R. Daley, Claudia Loetsch, Joanna Warren, Jin Yan Yap, Daniele Cultrone, Amanda J. Russell, Elisabeth K. Malle, Jeanette E. Villanueva, Mark J. Cowley, Velimir Gayevskiy, Marcel E. Dinger, Robert Brink, Geeta Chaudhri, Gunasegaran Karupiah, Belinda Whittle, Carla M. Roots, Edward M. Bertram, Michiko Yamada, Yogesh Jeelall, Anselm Enders, Ben E. Clifton, Peter D. Mabbitt, Colin J. Jackson, Susan R. Watson, Craig N. Jenne, Lewis L. Lanier, Tim Wiltshire, Matthew H. Spitzer, Garry P. Nolan, Frank Schmitz, Alan Aderem, Benjamin T. Porebski, Ashley M. Buckle, Derek W. Abbott, John B. Ziegler, Maria E. Craig, Paul Benitez‐Aguirre, Juliana Teo, Stuart G. Tangye, Melanie Wong, Murray P. Cox, Wilson Phung, Jia Tang, Wendy Sandoval, Ingrid E. Wertz, Daniel Christ, Christopher C. Goodnow, Shane T. Grey

Bibliographic record

VenueNature Immunology · 2019
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicNF-κB Signaling Pathways
Canadian institutionsUniversity of Calgary
FundersNational Institute of Allergy and Infectious DiseasesNational Health and Medical Research Council
KeywordsBiologyAllelePhosphorylationInnate immune systemGeneticsImmunityPhenotypeImmune systemGeneCell biologyImmunology

Abstract

fetched live from OpenAlex
No abstract in any covered source. Its absence is recorded, not treated as a negative.

No abstract. This is not a gap in this database; OpenAlex has none either. 23.3% of the frame is in this state, and the screen finds HALF as much metaresearch here, so the absence is a measured bias rather than a missing field.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.010

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.004
GPT teacher head0.227
Teacher spread0.223 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations76
Published2019
Admission routes1
Has abstractno

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