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Record W2978236883 · doi:10.1109/access.2019.2945524

SISC: End-to-End Interpretable Discovery Radiomics-Driven Lung Cancer Prediction via Stacked Interpretable Sequencing Cells

2019· article· en· W2978236883 on OpenAlexafffund
Devinder Kumar, Vignesh Sankar, David A. Clausi, Graham W. Taylor, Alexander Wong

Bibliographic record

VenueIEEE Access · 2019
Typearticle
Languageen
FieldMedicine
TopicRadiomics and Machine Learning in Medical Imaging
Canadian institutionsUniversity of GuelphUniversity of Waterloo
FundersNatural Sciences and Engineering Research Council of CanadaCanada Research ChairsNvidia
KeywordsInterpretabilityRadiomicsDiscriminative modelComputer scienceLung cancerArtificial intelligencePipeline (software)Machine learningMedicinePathology

Abstract

fetched live from OpenAlex

Lung cancer is the leading cause of cancer-related death worldwide. Computer-aided diagnosis (CAD) systems have shown significant promise in recent years for facilitating the effective detection and classification of abnormal lung nodules in computed tomography (CT) scans. While hand-engineered radiomic features have been traditionally used for lung cancer prediction, there have been significant recent successes achieving state-of-the-art results in the area of discovery radiomics. Here, radiomic sequencers comprising of highly discriminative radiomic features are discovered directly from archival medical data. However, the interpretation of predictions made using such radiomic sequencers remains a challenge. A novel end-to-end interpretable discovery radiomics-driven lung cancer prediction pipeline has been designed, build, and tested. The radiomic sequencer being discovered possesses a deep architecture comprised of stacked interpretable sequencing cells (SISC). The SISC architecture is shown to outperform previous approaches while providing more insight in to its decision making process. The SISC radiomic sequencer is able to achieve state-of-the-art results in lung cancer prediction, and also offers prediction interpretability in the form of critical response maps. The critical response maps are useful for not only validating the predictions of the proposed SISC radiomic sequencer, but also provide improved radiologist-machine collaboration for effective diagnosis.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.848
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.001
Open science0.0010.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.307
Teacher spread0.296 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations23
Published2019
Admission routes2
Has abstractyes

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