MétaCan
Menu
← Back to cohort

2460 A Father-Son Pair With APOB and PNPLA3 Double Heterozygosity Resulting in Advanced Nonalcoholic Fatty Liver Disease

2019· article· en· W2979940114 on OpenAlexaff
Claire Jansson‐Knodell, Samer Gawrieh, Adam D. McIntyre, Robert A. Hegele, Naga Chalasani

Bibliographic record

VenueThe American Journal of Gastroenterology · 2019
Typearticle
Languageen
FieldMedicine
TopicLiver Disease Diagnosis and Treatment
Canadian institutionsWestern UniversityRobarts Clinical Trials
Fundersnot available
KeywordsMedicineInternal medicineCirrhosisNonalcoholic fatty liver diseaseFatty liverGastroenterologyLoss of heterozygositySteatosisApolipoprotein BCompound heterozygosityLiver diseaseFamilial hypercholesterolemiaEndocrinologyCholesterolAlleleGeneticsDiseaseBiology

Abstract

fetched live from OpenAlex

INTRODUCTION: Mutations in apolipoprotein (apo) B cripple the machinery and transport needed for lipoprotein export from the liver resulting in familial hypobetalipoproteinemia (FHBL). In heterozygotes, the normal allele allows for sufficient transport and mobilization of fat from the liver, but homozygotes are unable to compensate, leading to elevated intrahepatic triglycerides, NASH, and cirrhosis. We report a father-son pair with heterozygote FHBL who developed advanced NASH which we believe is due to its compound heterozygosity with PNPLA3 , a gene important in the pathogenesis of NAFLD and NASH. CASE DESCRIPTION/METHODS: A Caucasian father and son of European ancestry were referred to our hepatology clinic. The son is a 46-year-old male who was evaluated for elevated transaminases and very low LDL-cholesterol. There was no significant alcohol consumption. Family history was significant for a father with cirrhosis and paternal grandmother who died of an unknown liver complication. Physical exam revealed obesity with hepatomegaly and acanthosis nigricans. Laboratory studies were notable for an LDL-cholesterol 15 mg/dL, triglycerides 30 mg/dL, and ALT 109 U/L. Increased liver echogenicity was found on ultrasound. Transient Elastography showed CAP of 327 dB/m (severe steatosis) and liver stiffness of 8.5 kPa (F2 fibrosis). Genetic testing revealed heterozygosity for both APOB (c.1830 -1G >A) and PNPLA3 (p.I148M) genes. The father is a 71-year-old male who was diagnosed with liver disease during evaluation for thrombocytopenia. There was no significant alcohol consumption. Physical examination revealed abdominal obesity and splenomegaly. Laboratory studies were notable for an LDL-cholesterol of 28 mg/dL and platelets of 83 k/mm 3 . Liver biopsy confirmed cirrhosis due to steatohepatitis and his HVPG was 12 mmHg. Recent imaging identified two small liver lesions with arterial enhancement, concerning for early liver cancer. Genetic testing revealed variants in both APOB and PNPLA3 genes identical to his son's mutations. DISCUSSION: We describe a father-son pair with double heterozygosity for APOB and PNPLA3 genes in the setting of obesity who developed progressive NASH. Neither APOB heterozygosity nor PNPLA3 heterozygosity is associated with advanced NAFLD, but their double heterozygosity may cause progressive NASH and cirrhosis, as illustrated here. A strong family history and very low serum LDL-cholesterol levels were helpful in working up this father-son pair.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Case report · Consensus signal: Case report
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.011
Threshold uncertainty score0.035

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.002
Meta-epidemiology (narrow)0.0030.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0030.001
Science and technology studies0.0020.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.0110.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.243
Teacher spread0.234 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designCase report
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2019
Admission routes1
Has abstractyes

Explore more

Same venueThe American Journal of Gastroenterology→Same topicLiver Disease Diagnosis and Treatment→French-language works237,207→