Engraftment and Long-Term Survival at Low Burden of Leukemic Blasts from Primary MRD+ Human Bone Marrow in a Xenotransplant Setting
Bibliographic record
Abstract
Abstract Minimal residual disease (MRD) in bone marrow (BM) at the end of induction or re-induction chemotherapy is a critical prognostic factor for long-term survival of children with acute lymphoblastic leukemia (ALL). The presence of submicroscopic disease is a significant predictor of leukemia relapse, such that MRD positivity (0.01% to 5%) informs risk-adapted treatment intensification following induction. As most cases of relapsed ALL involve a clone that existed as a minor subclone at diagnosis, strategies that enable characterization of the leukemic blasts surviving at the end of induction could further influence treatment selection; however, the low numbers of leukemic blasts in an MRD sample makes evaluation of their sensitivity to chemotherapy or other treatment modalities challenging. Immune-deficient NOD-scid/IL2Rγc null(NSG) mice are highly receptive to the engraftment and expansion of ALL blasts from diagnostic and relapse samples. However, little is known about the reproducibility of this approach for the small numbers of leukemic cells in primary MRD+ BM samples. To investigate the fate of MRD blasts following xenografting, MRD+ mononuclear cells from BM samples from 6 children with B-ALL in first (n=3) or subsequent remissions (n=3), with a median MRD level of 0.65% (range: 0.08-4.3%), were adoptively transferred into NSG mice by tail vein injection. Engraftment and expansion were monitored by regular flow cytometric evaluation of peripheral blood for human CD45 expressing cells, and mice were euthanized at onset of leukemia (human cell count > 15,000/ul) or after up to 1 year on study. BM, spleen and peripheral blood were harvested at time of death, and cells immunophenotyped with the identical 10-colour flow panel following a COG-validated, clinical MRD diagnostic algorithm. Human cell engraftment was confirmed in all recipient mice. Recipients of two of the MRD samples progressed to frank leukemia: one mouse injected with an MRD burden of 4.3% presented with an elevated WBC after 6 months and a blast count of 67% in spleen, while another mouse euthanized one year after injection of a 0.16% MRD+ sample had 75% blasts in BM that comprised both leukemic subclones present in the original MRD sample. Of the two MRD samples, only the former was from a patient that subsequently relapsed. Although all other recipient mice continued to show fluctuating, but sustained low levels of peripheral human cells (<5% of human CD45+ cells among mouse CD45+ peripheral blood cells), none progressed to overt leukemia. At sacrifice (range: 179-390 days, median 260 days), all remaining recipient mice were confirmed to contain leukemic blasts at low burden in BM, ranging from 0.001% to 0.675% of immunophenotypically verified human leukemic blasts in 1-1.5 million of total cells. An in-depth comparison of primary MRD samples and the mouse engrafted blasts revealed that similar immunophenotypic blast populations identified in the patient MRD sample were sustained for as long as 1 year in NSG mice; in several mice there was evidence of maintenance of two to three distinct immunophenotypic subclones that were present at day 0 and/or day 29 in the patient. Furthermore, in all recipient mice the vast majority of human cells were phenotypically confirmed to be blasts and no significant amount of normal human hematopoiesis following injection of the MRD samples was detected. This study demonstrates that heterogeneous leukemic cell populations from primary MRD+ BM samples can be successfully engrafted and sustained in NSG mice and that, in at least a subset of recipients, these blasts can progress to overt leukemia. Notably, one MRD-recipient mouse presented with leukemia prior to any progression in the patient, raising the possibility that this approach could be used to characterize potential relapse clones ahead of their clinical appearance. Furthermore, the sustained presence of leukemic blasts in all non-progressing recipients for as long as 1 year demonstrates the reproducibility of this approach for generating a stable, low level leukemia burden that resembles the MRD state. Such a setting may enable the evaluation of therapeutic interventions for efficacy against the residual blasts that will give rise to relapse in the patient. Disclosures No relevant conflicts of interest to declare.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.000 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.000 | 0.000 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.000 | 0.000 |
| Research integrity | 0.000 | 0.001 |
| Insufficient payload (model declined to judge) | 0.002 | 0.001 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".