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Record W2981654324 · doi:10.1002/mrm.28177

Reconstruction of undersampled 3D non‐Cartesian image‐based navigators for coronary MRA using an unrolled deep learning model

2020· preprint· en· W2981654324 on OpenAlexaff
Mario O. Malavé, Corey A. Baron, Srivathsan Koundinyan, Christopher M. Sandino, Frank Ong, Joseph Y. Cheng, Dwight G. Nishimura

Bibliographic record

VenueMagnetic Resonance in Medicine · 2020
Typepreprint
Languageen
FieldMedicine
TopicAdvanced MRI Techniques and Applications
Canadian institutionsWestern University
FundersNational Science Foundation Graduate Research Fellowship ProgramNational Heart, Lung, and Blood InstituteGE Healthcare
KeywordsComputer scienceCartesian coordinate systemArtificial intelligenceDeep learningConvolutional neural networkIterative reconstructionRegularization (linguistics)AlgorithmArtificial neural networkComputer visionMathematicsGeometry

Abstract

fetched live from OpenAlex

Purpose To rapidly reconstruct undersampled 3D non‐Cartesian image‐based navigators (iNAVs) using an unrolled deep learning (DL) model, enabling nonrigid motion correction in coronary magnetic resonance angiography (CMRA). Methods An end‐to‐end unrolled network is trained to reconstruct beat‐to‐beat 3D iNAVs acquired during a CMRA sequence. The unrolled model incorporates a nonuniform FFT operator in TensorFlow to perform the data‐consistency operation, and the regularization term is learned by a convolutional neural network (CNN) based on the proximal gradient descent algorithm. The training set includes 6,000 3D iNAVs acquired from 7 different subjects and 11 scans using a variable‐density (VD) cones trajectory. For testing, 3D iNAVs from 4 additional subjects are reconstructed using the unrolled model. To validate reconstruction accuracy, global and localized motion estimates from DL model‐based 3D iNAVs are compared with those extracted from 3D iNAVs reconstructed with ‐ESPIRiT. Then, the high‐resolution coronary MRA images motion corrected with autofocusing using the ‐ESPIRiT and DL model‐based 3D iNAVs are assessed for differences. Results 3D iNAVs reconstructed using the DL model‐based approach and conventional ‐ESPIRiT generate similar global and localized motion estimates and provide equivalent coronary image quality. Reconstruction with the unrolled network completes in a fraction of the time compared to CPU and GPU implementations of ‐ESPIRiT (20× and 3× speed increases, respectively). Conclusions We have developed a deep neural network architecture to reconstruct undersampled 3D non‐Cartesian VD cones iNAVs. Our approach decreases reconstruction time for 3D iNAVs, while preserving the accuracy of nonrigid motion information offered by them for correction.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.006
Threshold uncertainty score0.011

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.062
GPT teacher head0.362
Teacher spread0.300 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations10
Published2020
Admission routes1
Has abstractyes

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