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Record W2988778168 · doi:10.1016/j.cell.2019.10.008

Global Trends in Marine Plankton Diversity across Kingdoms of Life

2019· article· en· W2988778168 on OpenAlexafffund
Federico M. Ibarbalz, Nicolas Henry, Manoela C. Brandão, Séverine Martini, Greta Busseni, Hannah Byrne, Luís Pedro Coelho, Hisashi Endo, Josep M. Gasol, Ann Gregory, Frédéric Mahé, Janaína Rigonato, Marta Royo‐Llonch, Guillem Salazar, Isabel Sanz-Sáez, Eleonora Scalco, Dodji Soviadan, Ahmed A. Zayed, Adriana Zingone, Karine Labadie, Joannie Ferland, Claudie Marec, Stefanie Kandels, Marc Picheral, Céline Dimier, Julie Poulain, Sergey A. Pisarev, Margaux Carmichael, Stéphane Pesant, Silvia G. Acinas, Peer Bork, Emmanuel Boss, Chris Bowler, Guy Cochrane, Colomban de Vargas, Mick Follows, Gabriel Gorsky, Nigel Grimsley, Lionel Guidi, Pascal Hingamp, Daniele Iudicone, Olivier Jaillon, Lee Karp‐Boss, Eric Karsenti, Fabrice Not, Hiroyuki Ogata, Nicole Poulton, Jeroen Raes, Christian Sardet, Sabrina Speich, Lars Stemmann, Matthew B. Sullivan, Shinichi Sunagawa, Patrick Wincker, Hiroyuki Ogata, Éric Pelletier, Laurent Bopp, Patrick Wincker, Fabien Lombard, Lucie Zinger

Bibliographic record

VenueCell · 2019
Typearticle
Languageen
FieldEnvironmental Science
TopicMicrobial Community Ecology and Physiology
Canadian institutionsUniversité Laval
FundersFonds Français pour l'Environnement MondialPrince Albert II of Monaco FoundationInstitut Universitaire de FranceCentre National de la Recherche ScientifiqueMinisterio de Economía y CompetitividadEuropean CommissionCoordenação de Aperfeiçoamento de Pessoal de Nível SuperiorNational Aeronautics and Space AdministrationCanada Foundation for InnovationFondation Tara OcéanKing Abdullah University of Science and TechnologyEuropean Molecular Biology LaboratoryRégion BretagneVoice FoundationHarvard UniversityAgence Nationale de la RechercheOcean FoundationEuropean Research CouncilGordon and Betty Moore FoundationNational Science Foundation
KeywordsPlanktonBiologyEcologyMarine ecosystemEcosystemMarine lifeArchaeaDiversity (politics)Temperate climateBiodiversityOceanographyBacteriaPaleontology

Abstract

fetched live from OpenAlex

The ocean is home to myriad small planktonic organisms that underpin the functioning of marine ecosystems. However, their spatial patterns of diversity and the underlying drivers remain poorly known, precluding projections of their responses to global changes. Here we investigate the latitudinal gradients and global predictors of plankton diversity across archaea, bacteria, eukaryotes, and major virus clades using both molecular and imaging data from Tara Oceans. We show a decline of diversity for most planktonic groups toward the poles, mainly driven by decreasing ocean temperatures. Projections into the future suggest that severe warming of the surface ocean by the end of the 21 st century could lead to tropicalization of the diversity of most planktonic groups in temperate and polar regions. These changes may have multiple consequences for marine ecosystem functioning and services and are expected to be particularly significant in key areas for carbon sequestration, fisheries, and marine conservation. Video Abstract

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.008
Threshold uncertainty score0.020

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.002
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0060.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.229
Teacher spread0.217 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations512
Published2019
Admission routes2
Has abstractyes

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