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Impact of a Bayesian approach on the diagnosis of Interstitial Lung Diseases

2019· article· en· W2989674513 on OpenAlexaboutno aff
Voon Shiong Ronnie Tan, Sok Boon Tay, Felicia Teo, Pipetius Quah, Lynette Teo, Ching Ching Ong, Ju Ee Seet, Tow Keang Lim

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldMedicine
TopicInterstitial Lung Diseases and Idiopathic Pulmonary Fibrosis
Canadian institutionsnot available
Fundersnot available
KeywordsMedicinePulmonologistsLung biopsyInterstitial lung diseaseBiopsyRadiologyIdiopathic pulmonary fibrosisLungRadiological weaponInternal medicineIntensive care medicine

Abstract

fetched live from OpenAlex

Introduction: Current guidelines recommend a multi-disciplinary team (MDT) approach involving experienced pulmonologists, radiologists and pathologists in improving the confidence in diagnosing various interstitial lung diseases (ILD). However, accurately diagnosing fibrotic ILD remains a challenge with significant diagnostic heterogeneity, impacting the management and prognosis of patients. Aims: We evaluate the effects of implementing a Bayesian approach, incorporating clinical judgment, pre-test probability and radiological features, in improving the diagnosis of fibrotic ILD and reducing the number of unclassifiable ILD without the need for a surgical lung biopsy.(1) Methods: This is a prospective study of consecutive patients referred for MDT assessment from April 2015 to December 2018. We compared diagnostic categories and level of confidence between 2 groups of patients before and after the implementation of a Bayesian approach in ILD diagnosis.(1) Results: We report on the first 125 patients. The Bayesian approach was used in 46 (37%) patients. The proportion of cases with a confident diagnosis of idiopathic pulmonary fibrosis (IPF) was 25% and 22%, before and after the use of the approach, respectively (p=0.65). There was a trend towards a decrease in the proportion of cases with unclassifiable ILD, from 17% to 7% (p=0.11). Conclusion: A Bayesian approach in MDT discussion may reduce the number of cases with unclassifiable disease and improve the diagnostic classification of fibrotic ILD without the need for surgical biopsy. Further studies are needed on the utility and impact of this approach on subsequent management and patient-related outcomes. Reference: (1)Ryerson et al. Am J Respir Crit Care Med. 2017;196:1249

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.019
metaresearch head score (Gemma)0.111
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.019
Threshold uncertainty score0.102

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0190.111
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0010.002
Open science0.0010.002
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.276
Teacher spread0.265 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2019
Admission routes1
Has abstractyes

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