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Record W2990775205 · doi:10.1152/ajpcell.00425.2019

SLC4A11 function: evidence for H<sup>+</sup>(OH<sup>−</sup>) and NH<sub>3</sub>-H<sup>+</sup> transport

2019· article· en· W2990775205 on OpenAlexaff
Liyo Kao, Rustam Azimov, Xuesi M. Shao, Natalia Abuladze, Debra K. Newman, Hristina R. Zhekova, Sergei Y. Noskov, Alexander Pushkin, Ira Kurtz

Bibliographic record

VenueAmerican Journal of Physiology-Cell Physiology · 2019
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicIon Transport and Channel Regulation
Canadian institutionsUniversity of Calgary
FundersNational Institute of Diabetes and Digestive and Kidney DiseasesNational Heart, Lung, and Blood Institute
KeywordsAmmoniaIon transporterChemistryTranscellularExtracellularIntracellularFlux (metallurgy)TransporterIntracellular pHBiophysicsIonBiochemistryBiology

Abstract

fetched live from OpenAlex

Whether SLC4A11 transports ammonia and its potential mode of ammonia transport ([Formula: see text], NH 3 , or NH 3 -2H + transport have been proposed) are controversial. In the absence of ammonia, whether SLC4A11 mediates significant conductive H + (OH − ) transport is also controversial. The present study was performed to determine the mechanism of human SLC4A11 ammonia transport and whether the transporter mediates conductive H + (OH − ) transport in the absence of ammonia. We quantitated H + flux by monitoring changes in intracellular pH (pH i ) and measured whole cell currents in patch-clamp studies of HEK293 cells expressing the transporter in the absence and presence of NH 4 Cl. Our results demonstrate that SLC4A11 mediated conductive H + (OH − ) transport that was stimulated by raising the extracellular pH (pH e ). Ammonia-induced HEK293 whole cell currents were also stimulated by an increase in pH e . In studies using increasing NH 4 Cl concentrations with equal [Formula: see text] extracellular and intracellular concentrations, the shift in the reversal potential ( E rev ) due to the addition of ammonia was compatible with NH 3 -H + transport competing with H + (OH − ) rather than NH 3 -nH + ( n ≥ 2) transport. The increase in equivalent H + (OH − ) flux observed in the presence of a transcellular H + gradient was also compatible with SLC4A11-mediated NH 3 -H + flux. The NH 3 versus E rev data fit a theoretical model suggesting that NH 3 -H + and H + (OH − ) competitively interact with the transporter. Studies of mutant SLC4A11 constructs in the putative SLC4A11 ion coordination site showed that both H + (OH − ) transport and ammonia-induced whole cell currents were blocked suggesting that the H + (OH − ) and NH 3 -H + transport processes share common features involving the SLC4A11 transport mechanism.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.149
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.227
Teacher spread0.218 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations22
Published2019
Admission routes1
Has abstractyes

Explore more

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