MétaCan
Menu
Back to cohort
Record W2994955313 · doi:10.1088/1361-6560/ab63ba

External validation and transfer learning of convolutional neural networks for computed tomography dental artifact classification

2019· article· en· W2994955313 on OpenAlexafffund
Mattea Welch, Chris McIntosh, Alberto Traverso, Leonard Wee, André Dekker, Benjamin Haibe‐Kains, David A. Jaffray

Bibliographic record

VenuePhysics in Medicine and Biology · 2019
Typearticle
Languageen
FieldEngineering
TopicAdvanced X-ray and CT Imaging
Canadian institutionsVector InstitutePrincess Margaret Cancer CentreInstitute of Cancer ResearchOntario Institute for Cancer ResearchUniversity of TorontoUniversity Health Network
FundersCanadian Institutes of Health ResearchTerry Fox Research InstituteOntario Institute for Cancer Research
KeywordsTransfer of learningComputer scienceConvolutional neural networkGeneralizability theoryArtificial intelligenceQuality assuranceResamplingRobustness (evolution)Pattern recognition (psychology)VisualizationMachine learningMathematicsStatisticsMedicine

Abstract

fetched live from OpenAlex

Abstract Quality assurance of data prior to use in automated pipelines and image analysis would assist in safeguarding against biases and incorrect interpretation of results. Automation of quality assurance steps would further improve robustness and efficiency of these methods, motivating widespread adoption of techniques. Previous work by our group demonstrated the ability of convolutional neural networks (CNN) to efficiently classify head and neck (H&N) computed-tomography (CT) images for the presence of dental artifacts (DA) that obscure visualization of structures and the accuracy of Hounsfield units. In this work we demonstrate the generalizability of our previous methodology by validating CNNs on six external datasets, and the potential benefits of transfer learning with fine-tuning on CNN performance. 2112 H&N CT images from seven institutions were scored as DA positive or negative. 1538 images from a single institution were used to train three CNNs with resampling grid sizes of 64 3 , 128 3 and 256 3 . The remaining six external datasets were used in five-fold cross-validation with a data split of 20% training/fine-tuning and 80% validation. The three pre-trained models were each validated using the five-folds of the six external datasets. The pre-trained models also underwent transfer learning with fine-tuning using the 20% training/fine-tuning data, and validated using the corresponding validation datasets. The highest micro-averaged AUC for our pre-trained models across all external datasets occurred with a resampling grid of 256 3 (AUC = 0.91 ± 0.01). Transfer learning with fine-tuning improved generalizability when utilizing a resampling grid of 256 3 to a micro-averaged AUC of 0.92 ± 0.01. Despite these promising results, transfer learning did not improve AUC when utilizing small resampling grids or small datasets. Our work demonstrates the potential of our previously developed automated quality assurance methods to generalize to external datasets. Additionally, we showed that transfer learning with fine-tuning using small portions of external datasets can be used to fine-tune models for improved performance when large variations in images are present.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.758
Threshold uncertainty score0.193

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.068
GPT teacher head0.313
Teacher spread0.245 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations14
Published2019
Admission routes2
Has abstractyes

Explore more

Same venuePhysics in Medicine and BiologySame topicAdvanced X-ray and CT ImagingFrench-language works237,207