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Record W2996177000 · doi:10.7554/elife.50496.sa2

Author response: Myofibril diameter is set by a finely tuned mechanism of protein oligomerization in Drosophila

2019· peer-review· en· W2996177000 on OpenAlexaff
Nicanor González‐Morales, Yu Shu Xiao, Matthew A. Schilling, Océane Marescal, Kuo An Liao, Frieder Schöck

Bibliographic record

Venuenot available
Typepeer-review
Languageen
FieldMedicine
TopicCardiomyopathy and Myosin Studies
Canadian institutionsMcGill University
Fundersnot available
KeywordsSarcomereMyofibrilTitinGene isoformMyosinMyofilamentChemistryCell biologyAnatomyBiophysicsMyocyteBiologyBiochemistry

Abstract

fetched live from OpenAlex

Muscles are made up of many long muscle fibers, each containing thousands of cylindrical segments called sarcomeres. When animals move, proteins in the sarcomere move past each other, shortening the muscles. Inside each muscle, all sarcomeres have the same length and diameter. The protein titin controls the length of each sarcomere, but it was unknown what controls the diameter. At the end of each sarcomere is a structure called the Z-disc that is composed of many muscle proteins. Mutations in Z-disc proteins are often involved in diseases called myopathies, where muscle structure breaks down. As the size of the Z-disc determines sarcomere diameter, improper regulation of sarcomere diameter could contribute to myopathies. One Z-disc protein called Zasp is a candidate for controlling diameter and can have many different forms in the same cells. Zasp has a similar role in most animals including humans, mice and flies. González-Morales et al. investigated Zasp in the muscles of the fruit fly, Drosophila melanogaster. Gene editing was used to vary the amounts of different forms of Zasp inside the muscles. The results revealed two types of Zasp, those that make sarcomeres wider, and those that limit growth. Reducing the second type of Zasp resulted in bigger Z-discs and in muscle aggregates similar to the ones seen in patients with certain myopathies. This study reveals a mechanism for coordinating the development of muscle. It also reveals the likely cause of certain myopathies and suggests a possible target for future treatment through regulation of Zasp proteins.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.005
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Commentary · Consensus signal: Commentary
Teacher disagreement score0.222
Threshold uncertainty score0.744

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.005
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0020.001
Open science0.0010.002
Research integrity0.0040.003
Insufficient payload (model declined to judge)0.2220.072

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.044
GPT teacher head0.330
Teacher spread0.286 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreCommentary

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2019
Admission routes1
Has abstractyes

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