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Record W2996985676 · doi:10.1093/jas/skz258.590

PSI-16 Exploring complete blood count as a predictor of resilience in pigs using a natural disease challenge model

2019· article· en· W2996985676 on OpenAlexaff
Xuechun Bai, Austin M. Putz, Zhiquan Wang, Frédéric Fortin, John C. S. Harding, Jack C. M. Dekkers, Catherine J. Field, Graham Plastow

Bibliographic record

VenueJournal of Animal Science · 2019
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic and phenotypic traits in livestock
Canadian institutionsCentre de Développement du Porc du QuébecUniversity of SaskatchewanUniversity of Alberta
Fundersnot available
KeywordsBiologyPsychological resilienceDiseaseHerdHerd immunityResilience (materials science)TraitImmunologyMedicineAnimal scienceInternal medicinePsychologyVaccination

Abstract

fetched live from OpenAlex

Abstract Disease resilience is defined as an animal’s ability to maintain a relatively undepressed performance in the face of infections, due to optimal resource allocation between immunity and productivity. Extending breeding goals with resilience is a pragmatic way to improve herd health and reduce economic losses related to infectious diseases. To make genetic improvement for resilience, there is a need for predictors that can be obtained in high health nucleus herds where the selection of breeding animals takes place. Therefore, our study aimed to determine whether a clinical measure, CBC, is a useful indicator trait for resilience. Least square means and variance component analyses were conducted using CBC and 660K SNP genotype data of 2593 pigs that went through a nursery-to-finish natural disease challenge model and exhibited divergent responses in terms of growth and individual medication. CBC taken from healthy pigs before challenge did not show differences between resilient and susceptible pigs. However, resilient animals showed a significantly greater increase of lymphocytes at the early stages of infection and hemoglobin at the late stage. Neutrophils in resilient animals showed a tendency for a reduction during the late stage of infection. These results suggest that CBC traits could provide an indication of a change in resource allocation in response to infection. Resilient animals are expected to allocate more resources towards immunity during the early stages of infection to help limit infection so as to resolve inflammation and recover earlier in order to maintain high rates of production. CBC traits were heritable and genetically correlated with growth and treatment, which may indicate the potential to develop CBC as a predictor for the selection of resilience among breeding animals. Further studies are underway to test if CBC traits have value as an indicator of resilience in combination with genome-wide association studies and genomic prediction.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.038
GPT teacher head0.274
Teacher spread0.236 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2019
Admission routes1
Has abstractyes

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