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Comparing ICD-Data Across Countries: A Case for Visualization?

2019· article· en· W2997710399 on OpenAlexaff
Lucia Otero Varela, Søren Knudsen, Sheelagh Carpendale, Catherine Eastwood, Hude Quan

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicBiomedical Text Mining and Ontologies
Canadian institutionsUniversity of Calgary
Fundersnot available
KeywordsComparabilityGeneralizability theoryVisual analyticsVisualizationCoding (social sciences)Data scienceData visualizationComputer scienceAnalyticsData collectionData miningStatistics

Abstract

fetched live from OpenAlex

We present our preliminary results of an international survey on the practical adoption and use of the International Classification of Diseases (ICD) from a visualization and visual analytics perspective. The ICD system, in different versions, is globally used for coding morbidity and mortality statistics, however, coding practices vary across countries. Our survey includes questions about hospital data collection systems, use of features in ICD, and training of ICD coding specialists. Variations in ICD could hinder comparability and limit generalizability of observed findings. Our preliminary results establish the current state of ICD use and training internationally, and will ultimately be valuable to the World Health Organization to further research on how to improve ICD coding, and enhance international comparisons of health data. From a visualization and visual analytics perspective, the current differences in adoption and use of ICD poses challenges and opportunities. For example, when morbidity-data from two countries differ in their coding, can we still compare data from these countries, and if so, then under which circumstances? We discuss how visualization and visual analytics might help in these situations.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.187
metaresearch head score (Gemma)0.537
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.187
Threshold uncertainty score0.987

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.1870.537
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0020.002
Bibliometrics0.0130.026
Science and technology studies0.0030.007
Scholarly communication0.0180.024
Open science0.0040.013
Research integrity0.0030.006
Insufficient payload (model declined to judge)0.0060.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.063
GPT teacher head0.392
Teacher spread0.329 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations1
Published2019
Admission routes1
Has abstractyes

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