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Record W3005254274 · doi:10.1093/imamat/hxaa023

Stable asymmetric spike equilibria for the Gierer–Meinhardt model with a precursor field

2020· article· en· W3005254274 on OpenAlexaff
Théodore Kolokolnikov, Frédéric Paquin-Lefebvre, Michael J. Ward

Bibliographic record

VenueIMA Journal of Applied Mathematics · 2020
Typearticle
Languageen
FieldComputer Science
TopicNonlinear Dynamics and Pattern Formation
Canadian institutionsUniversity of British ColumbiaUniversity of British Columbia HospitalDalhousie University
Fundersnot available
KeywordsBifurcationPattern formationEigenvalues and eigenvectorsLinearizationReaction–diffusion systemBifurcation diagramSteady state (chemistry)Parameter spaceHopf bifurcationSpike (software development)Vector fieldPhysicsMathematicsNonlinear systemMathematical analysisStatistical physicsGeometryChemistry

Abstract

fetched live from OpenAlex

Abstract Precursor gradients in a reaction-diffusion system are spatially varying coefficients in the reaction kinetics. Such gradients have been used in various applications, such as the head formation in the Hydra, to model the effect of pre-patterns and to localize patterns in various spatial regions. For the 1D Gierer–Meinhardt (GM) model, we show that a non-constant precursor gradient in the decay rate of the activator can lead to the existence of stable, asymmetric and two-spike patterns, corresponding to localized peaks in the activator of different heights. These stable, asymmetric patterns co-exist in the same parameter space as symmetric two-spike patterns. This is in contrast to a constant precursor case, for which asymmetric spike patterns are known to be unstable. Through a determination of the global bifurcation diagram of two-spike steady-state patterns, we show that asymmetric patterns emerge from a supercritical symmetry-breaking bifurcation along the symmetric two-spike branch as a parameter in the precursor field is varied. Through a combined analytical-numerical approach, we analyse the spectrum of the linearization of the GM model around the two-spike steady state to establish that portions of the asymmetric solution branches are linearly stable. In this linear stability analysis, a new class of vector-valued non-local eigenvalue problem is derived and analysed.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.000
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0030.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.026
GPT teacher head0.244
Teacher spread0.218 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations13
Published2020
Admission routes1
Has abstractyes

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Same venueIMA Journal of Applied MathematicsSame topicNonlinear Dynamics and Pattern FormationFrench-language works237,207