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Record W3005937372 · doi:10.1002/alz.12032

Predicting sporadic Alzheimer's disease progression via inherited Alzheimer's disease‐informed machine‐learning

2020· article· en· W3005937372 on OpenAlexfundno aff
Nicolai Franzmeier, Nikolaos Koutsouleris, Tammie L.S. Benzinger, Alison Goate, Celeste M. Karch, Anne M. Fagan, Eric McDade, Marco Duering, Martin Dichgans, Johannes Levin, Brian A. Gordon, Yen Ying Lim, Colin L. Masters, Martin N. Rossor, Nick C. Fox, Antoinette O’Connor, Jasmeer P. Chhatwal, Stephen Salloway, Adrian Danek, Jason Hassenstab, Peter R. Schofield, John C. Morris, Randall J. Bateman

Bibliographic record

VenueAlzheimer s & Dementia · 2020
Typearticle
Languageen
FieldMedicine
TopicDementia and Cognitive Impairment Research
Canadian institutionsnot available
FundersCanadian Institutes of Health ResearchGenentechNational Institutes of HealthUK Dementia Research InstituteFleniIXICODeutsches Zentrum für Neurodegenerative ErkrankungenH. Lundbeck A/SServierEisaiAlzheimer Forschung InitiativeKorea Health Industry Development InstituteNational Institute on AgingNational Institute for Health and Care ResearchJapan Agency for Medical Research and DevelopmentBioClinicaBiogenPfizerNovartis Pharmaceuticals CorporationF. Hoffmann-La RocheU.S. Department of DefenseEli Lilly and CompanyBristol-Myers SquibbUniversity College London Hospitals NHS Foundation TrustEuropean CommissionMedical Research CouncilMeso Scale DiagnosticsAlzheimer's AssociationFoundation for the National Institutes of Health
KeywordsBiomarkerCognitive declineMagnetic resonance imagingDiseasePositron emission tomographyCognitionAlzheimer's diseaseNeuroimagingAlzheimer's Disease Neuroimaging InitiativeMedicineSample size determinationOncologyPsychologyInternal medicinePsychiatryDementiaNuclear medicineBiologyRadiologyStatistics

Abstract

fetched live from OpenAlex

INTRODUCTION: Developing cross-validated multi-biomarker models for the prediction of the rate of cognitive decline in Alzheimer's disease (AD) is a critical yet unmet clinical challenge. METHODS: We applied support vector regression to AD biomarkers derived from cerebrospinal fluid, structural magnetic resonance imaging (MRI), amyloid-PET and fluorodeoxyglucose positron-emission tomography (FDG-PET) to predict rates of cognitive decline. Prediction models were trained in autosomal-dominant Alzheimer's disease (ADAD, n = 121) and subsequently cross-validated in sporadic prodromal AD (n = 216). The sample size needed to detect treatment effects when using model-based risk enrichment was estimated. RESULTS: = 25%) in sporadic AD. Model-based risk-enrichment reduced the sample size required for detecting simulated intervention effects by 50%-75%. DISCUSSION: Our independently validated machine-learning model predicted cognitive decline in sporadic prodromal AD and may substantially reduce sample size needed in clinical trials in AD.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.011
metaresearch head score (Gemma)0.020
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.011
Threshold uncertainty score0.057

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0110.020
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.034
GPT teacher head0.316
Teacher spread0.282 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations74
Published2020
Admission routes1
Has abstractyes

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